RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SLITRK5O94991 958 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 KCNK2O95069 426 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 KCNH1O95259 989 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 PGM3O95394 542 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 ZNF16P17020 682 aaPredicted RBP11.38□□□□□ -0.59
UBR4-213ENST00000483922 IMPDH1P20839 514 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 IGHV1-2P23083 117 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 IGFBP5P24593 272 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 TTKP33981 857 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 NTF4P34130 210 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 FOXF1Q12946 379 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 KIAA0040Q15053 153 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 TSNAXIP1Q2TAA8 658 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 ZNF385BQ569K4 471 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 TMEM201Q5SNT2 666 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 GTF2IRD2BQ6EKJ0 949 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 ANKRD26P1Q6NSI1 321 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 CBLN3Q6UW01 205 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 Q6ZSR9 355 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 GPRIN3Q6ZVF9 776 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 GTF2IRD2Q86UP8 949 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 LSRQ86X29 649 aaPredicted RBP11.38□□□□□ -0.59
UBR4-213ENST00000483922 CDC26Q8NHZ8 85 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 FBXO30Q8TB52 745 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 DCAKDQ8WVC6 231 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 OTUB1Q96FW1 271 aaPredicted RBP11.38□□□□□ -0.59
UBR4-213ENST00000483922 PSD2Q9BQI7 771 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 POTEKPQ9BYX7 375 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 TNFRSF12AQ9NP84 129 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 NGBQ9NPG2 151 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 STOML1Q9UBI4 398 aa11.38□□□□□ -0.59
UBR4-213ENST00000483922 MRTO4Q9UKD2 239 aaKnown RBP11.38□□□□□ -0.59
UBR4-213ENST00000483922 UTP11Q9Y3A2 253 aaKnown RBP11.38□□□□□ -0.59
UBR4-213ENST00000483922 TRIM49D1C9J1S8 452 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 ZNF195O14628 629 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 PRPS2P11908 318 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 OR3A2P47893 321 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 PSMD4P55036 377 aaKnown RBP11.37□□□□□ -0.59
UBR4-213ENST00000483922 CASP9P55211 416 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 CDH11P55287 796 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 ZNF763Q0D2J5 394 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 PPA1Q15181 289 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 RNPS1Q15287 305 aaKnown RBP11.37□□□□□ -0.59
UBR4-213ENST00000483922 ZNHIT3Q15649 155 aaPredicted RBP11.37□□□□□ -0.59
UBR4-213ENST00000483922 STK11Q15831 433 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 NRF1Q16656 503 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 DUSP5Q16690 384 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 TMEM176BQ3YBM2 270 aaPredicted RBP11.37□□□□□ -0.59
UBR4-213ENST00000483922 TEX35Q5T0J7 233 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 CCNJQ5T5M9 372 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 CYB5R2Q6BCY4 276 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 Q6ZT83 130 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 FCRLAQ7L513 359 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 TDRPQ86YL5 185 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 FBXO27Q8NI29 283 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 C10orf105Q8TEF2 133 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 CIDECQ96AQ7 238 aaPredicted RBP11.37□□□□□ -0.59
UBR4-213ENST00000483922 ZNF300Q96RE9 604 aaPredicted RBP11.37□□□□□ -0.59
UBR4-213ENST00000483922 PAFAH2Q99487 392 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 GSTO2Q9H4Y5 243 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 ALG2Q9H553 416 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 BCO1Q9HAY6 547 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 MYNNQ9NPC7 610 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 NTMQ9P121 344 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 ICAM5Q9UMF0 924 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 CCL27Q9Y4X3 112 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 POLR3HQ9Y535 204 aaPredicted RBP11.37□□□□□ -0.59
UBR4-213ENST00000483922 MALRD1Q5VYJ5 2156 aa11.37□□□□□ -0.59
UBR4-213ENST00000483922 A0A1W2PNR3 127 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 NPIPB8E9PQR5 432 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 LMX1BO60663 402 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 HMOX2P30519 316 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 NUDT6P53370 316 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 PRKAG1P54619 331 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 FOXG1P55316 489 aaPredicted RBP11.36□□□□□ -0.59
UBR4-213ENST00000483922 ZNF117Q03924 483 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 HSPB3Q12988 150 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 NDUFAF6Q330K2 333 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 SPDYAQ5MJ70 313 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 PDSS1Q5T2R2 415 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 AGAP6Q5VW22 663 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 B4GALNT2Q8NHY0 566 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 CPNE4Q96A23 557 aaPredicted RBP11.36□□□□□ -0.59
UBR4-213ENST00000483922 SHCBP1LQ9BZQ2 653 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 ANKZF1Q9H8Y5 726 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 C3orf14Q9HBI5 128 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 GP6Q9HCN6 339 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 UBQLN4Q9NRR5 601 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 CBLN4Q9NTU7 201 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 PYCARDQ9ULZ3 195 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 SNX8Q9Y5X2 465 aa11.36□□□□□ -0.59
UBR4-213ENST00000483922 PLCE1Q9P212 2302 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 NPIPA5A0A0B4J1W7 369 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 ESPNB1AK53 854 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 VWC2LB2RUY7 222 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 NPIPA7E9PJI5 369 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 HAX1O00165 279 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 SMAD9O15198 467 aaKnown RBP11.35□□□□□ -0.59
UBR4-213ENST00000483922 IFI6P09912 130 aa11.35□□□□□ -0.59
UBR4-213ENST00000483922 PABPC4LP0CB38 370 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms