RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 EGFL7Q9UHF1 273 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 DKKL1Q9UK85 242 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 AP3M1Q9Y2T2 418 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 GPC6Q9Y625 555 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 B8ZZF3 427 aa16.23■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF264O43296 627 aa16.23■□□□□ 0.19
CPNE1-224ENST00000483359 NUDT14O95848 222 aa16.23■□□□□ 0.19
CPNE1-224ENST00000483359 ETS2P15036 469 aa16.23■□□□□ 0.19
CPNE1-224ENST00000483359 PCBP3P57721 371 aaKnown RBP16.23■□□□□ 0.19
CPNE1-224ENST00000483359 BNIP1Q12981 228 aa16.23■□□□□ 0.19
CPNE1-224ENST00000483359 LRRC23Q53EV4 343 aaPredicted RBP16.23■□□□□ 0.19
CPNE1-224ENST00000483359 AP1ARQ63HQ0 302 aa16.23■□□□□ 0.19
CPNE1-224ENST00000483359 OR2M3Q8NG83 312 aa16.23■□□□□ 0.19
CPNE1-224ENST00000483359 UBQLN3Q9H347 655 aa16.23■□□□□ 0.19
CPNE1-224ENST00000483359 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.23■□□□□ 0.19
CPNE1-224ENST00000483359 VDAC3Q9Y277 283 aa16.23■□□□□ 0.19
CPNE1-224ENST00000483359 LIPGQ9Y5X9 500 aa16.23■□□□□ 0.19
CPNE1-224ENST00000483359 GSTA4O15217 222 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 ZNHIT1O43257 154 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 CBR3O75828 277 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 NCK1P16333 377 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 PGM1P36871 562 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 HSF1Q00613 529 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 DMTNQ08495 405 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 LARS2Q15031 903 aaKnown RBP16.22■□□□□ 0.19
CPNE1-224ENST00000483359 CMPK2Q5EBM0 449 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 INTS11Q5TA45 600 aaKnown RBP16.22■□□□□ 0.19
CPNE1-224ENST00000483359 ARSKQ6UWY0 536 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 YRDCQ86U90 279 aaKnown RBP16.22■□□□□ 0.19
CPNE1-224ENST00000483359 ARMC8Q8IUR7 673 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 SIAH3Q8IW03 269 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 SLC30A8Q8IWU4 369 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 FADS6Q8N9I5 356 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 B4GALNT2Q8NHY0 566 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 CNOT9Q92600 299 aaKnown RBP16.22■□□□□ 0.19
CPNE1-224ENST00000483359 RSPO3Q9BXY4 272 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-224ENST00000483359 RPH3AQ9Y2J0 694 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-224ENST00000483359 M0QX08 132 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 RYKP34925 604 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 TLE1Q04724 770 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 SKP2Q13309 424 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 HYAL4Q2M3T9 481 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 SAMD4BQ5PRF9 694 aaKnown RBP16.22■□□□□ 0.19
CPNE1-224ENST00000483359 CLIP4Q8N3C7 705 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 SLC26A7Q8TE54 656 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 PMM1Q92871 262 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 TAMM41Q96BW9 452 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 SLC7A6OSQ96CW6 309 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-224ENST00000483359 SPATA5L1Q9BVQ7 753 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 PTGES2Q9H7Z7 377 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 ZDHHC11Q9H8X9 412 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 DNAJB12Q9NXW2 375 aaKnown RBP16.22■□□□□ 0.19
CPNE1-224ENST00000483359 SLC35A3Q9Y2D2 325 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 IFT52Q9Y366 437 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 CHST2Q9Y4C5 530 aa16.22■□□□□ 0.19
CPNE1-224ENST00000483359 GYG2O15488 501 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 FRS3O43559 492 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 TPST1O60507 370 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 SERPINB7O75635 380 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 PDE5AO76074 875 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 THBS1P07996 1170 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 DPP4P27487 766 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 CRYBA2P53672 197 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 EEF1A1P68104 462 aaKnown RBP16.21■□□□□ 0.19
CPNE1-224ENST00000483359 CEACAM7Q14002 265 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 VEZF1Q14119 521 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 EIPR1Q53HC9 387 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 WIPI1Q5MNZ9 446 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF324BQ6AW86 544 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-224ENST00000483359 COMTD1Q86VU5 262 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 SPPL2CQ8IUH8 684 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 FAM83FQ8NEG4 500 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-224ENST00000483359 OR14L1PQ8NHC6 308 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 CLPTM1LQ96KA5 538 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 C1orf21Q9H246 121 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 SLC6A15Q9H2J7 730 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 TNFRSF10DQ9UBN6 386 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 ICAM5Q9UMF0 924 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF232Q9UNY5 417 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 PCNX3Q9H6A9 2034 aa16.21■□□□□ 0.19
CPNE1-224ENST00000483359 CDHR4A6H8M9 788 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 SHISA8B8ZZ34 492 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 CXCR6O00574 342 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 MFN2O95140 757 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 GKN3PP0CG01 181 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 P2RX1P51575 399 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 FOXK1P85037 733 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 PATL1Q86TB9 770 aaKnown RBP16.2■□□□□ 0.18
CPNE1-224ENST00000483359 LSRQ86X29 649 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-224ENST00000483359 OR5M1Q8NGP8 315 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 OIT3Q8WWZ8 545 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 C1GALT1C1Q96EU7 318 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 SLX1AQ9BQ83 275 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 LDAHQ9H6V9 325 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 EXO5Q9H790 373 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 SVILO95425 2214 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 IGLV3-32A0A0A0MS00 114 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 EBAG9O00559 213 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 DNAJA2O60884 412 aa16.2■□□□□ 0.18
CPNE1-224ENST00000483359 ADAM11O75078 769 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms