RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SLAMF8Q9P0V8 285 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 ZNF223Q9UK11 482 aaPredicted RBP13.18□□□□□ -0.3
USP11-207ENST00000478596 PPIEQ9UNP9 301 aaKnown RBP13.18□□□□□ -0.3
USP11-207ENST00000478596 PCDHGB3Q9Y5G1 929 aa13.18□□□□□ -0.3
USP11-207ENST00000478596 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.18□□□□□ -0.3
USP11-207ENST00000478596 PINLYPA6NC86 204 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 FRG2CA6NGY1 282 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 TTC36A6NLP5 189 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 DUXAA6NLW8 204 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 B2RBV5 119 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 C5orf58C9J3I9 102 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 PRKNO60260 465 aaPredicted RBP13.17□□□□□ -0.3
USP11-207ENST00000478596 HNRNPCL1O60812 293 aaKnown RBP13.17□□□□□ -0.3
USP11-207ENST00000478596 AGR2O95994 175 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 ACP2P11117 423 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 ETFAP13804 333 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 ATP6V1C1P21283 382 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 S1PR1P21453 382 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 GABRA3P34903 492 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 SSR4P51571 173 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 SLC7A2P52569 658 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 PSME3P61289 254 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 POU6F2P78424 691 aaPredicted RBP13.17□□□□□ -0.3
USP11-207ENST00000478596 TXNL4AP83876 142 aaKnown RBP13.17□□□□□ -0.3
USP11-207ENST00000478596 PLGLB1Q02325 96 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 GPAT3Q53EU6 434 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 GCNT6Q5T4J0 391 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 ZCCHC12Q6PEW1 402 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 DLEU7Q6UYE1 221 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 MSRB3Q8IXL7 192 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 TMEM156Q8N614 296 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 NAXEQ8NCW5 288 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 OR2M7Q8NG81 312 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 OR8J3Q8NGG0 315 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 NUBPLQ8TB37 319 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 ASB15Q8WXK1 588 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 VSTM2LQ96N03 204 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 ECSITQ9BQ95 431 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 GSX2Q9BZM3 304 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 NXF5Q9H1B4 397 aaKnown RBP13.17□□□□□ -0.3
USP11-207ENST00000478596 SPAG4Q9NPE6 437 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 GPATCH2Q9NW75 528 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 P2RX2Q9UBL9 471 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 MRTO4Q9UKD2 239 aaKnown RBP13.17□□□□□ -0.3
USP11-207ENST00000478596 ERVK-11Q9UQG0 969 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 MPDZO75970 2070 aa13.17□□□□□ -0.3
USP11-207ENST00000478596 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 FXYD1O00168 92 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 ACOX3O15254 700 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 ITGA10O75578 1167 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 OR2J2O76002 312 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 PSMG1O95456 288 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 OR12D1P0DN82 309 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 NR2F1P10589 423 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 FPR1P21462 350 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 CEACAM8P31997 349 aaPredicted RBP13.16□□□□□ -0.3
USP11-207ENST00000478596 PPICP45877 212 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 RASSF2P50749 326 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 PSMD4P55036 377 aaKnown RBP13.16□□□□□ -0.3
USP11-207ENST00000478596 PSPHP78330 225 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 SLC25A3Q00325 362 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 FADDQ13158 208 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 DUSP5Q16690 384 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 DECR1Q16698 335 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 RABL3Q5HYI8 236 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 COX20Q5RI15 118 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 HACD2Q6Y1H2 254 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 ULK2Q8IYT8 1036 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 DEFB107AQ8IZN7 70 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 FAM109AQ8N4B1 249 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 PSD4Q8NDX1 1056 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 FAM13CQ8NE31 585 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 XAGE5Q8WWM1 108 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 PIK3R3Q92569 461 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 RAB8BQ92930 207 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 GIMAP5Q96F15 307 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 BTBD9Q96Q07 612 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 CCL19Q99731 98 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 HOPXQ9BPY8 73 aaPredicted RBP13.16□□□□□ -0.3
USP11-207ENST00000478596 LMF2Q9BU23 707 aaKnown RBP13.16□□□□□ -0.3
USP11-207ENST00000478596 PIF1Q9H611 641 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 NTMQ9P121 344 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 MYOTQ9UBF9 498 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 NPFFR2Q9Y5X5 522 aa13.16□□□□□ -0.3
USP11-207ENST00000478596 TRBV5-3A0A0A0MS03 114 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 A8MVJ9 347 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 GYG2O15488 501 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 TLX2O43763 284 aaPredicted RBP13.15□□□□□ -0.3
USP11-207ENST00000478596 REM1O75628 298 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 ATP5HO75947 161 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 AK1P00568 194 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 BCHEP06276 602 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 PTPN6P29350 595 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 SOX18P35713 384 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 MAN2A2P49641 1150 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 SELPLGQ14242 412 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 GNA13Q14344 377 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 RGNQ15493 299 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 DNAL1Q4LDG9 190 aa13.15□□□□□ -0.3
USP11-207ENST00000478596 RUNDC3AQ59EK9 446 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms