RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 TRGV8A0A0C4DH27 118 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 ZIC3O60481 467 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 PTGS2P35354 604 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 ZNF117Q03924 483 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 RBBP4Q09028 425 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 GLYR1Q49A26 553 aaPredicted RBP24.31■■□□□ 1.48
CCM2-211ENST00000478582 EIPR1Q53HC9 387 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 NHSL2Q5HYW2 709 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 WIPI1Q5MNZ9 446 aaPredicted RBP24.31■■□□□ 1.48
CCM2-211ENST00000478582 HACD2Q6Y1H2 254 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 EIF3MQ7L2H7 374 aaKnown RBP24.31■■□□□ 1.48
CCM2-211ENST00000478582 MAMDC2Q7Z304 686 aaPredicted RBP24.31■■□□□ 1.48
CCM2-211ENST00000478582 SERPINA11Q86U17 422 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 BBS10Q8TAM1 723 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 GPATCH1Q9BRR8 931 aaKnown RBP24.31■■□□□ 1.48
CCM2-211ENST00000478582 QRSL1Q9H0R6 528 aaKnown RBP24.31■■□□□ 1.48
CCM2-211ENST00000478582 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.31■■□□□ 1.48
CCM2-211ENST00000478582 TAS2R10Q9NYW0 307 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 DKKL1Q9UK85 242 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 ICAM5Q9UMF0 924 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 SLC35A3Q9Y2D2 325 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 L3MBTL1Q9Y468 752 aa24.31■■□□□ 1.48
CCM2-211ENST00000478582 GTPBP1O00178 669 aaKnown RBP24.3■■□□□ 1.48
CCM2-211ENST00000478582 AIM2O14862 343 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 ZNF264O43296 627 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 HCRTR2O43614 444 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 PGM3O95394 542 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 CLDN1O95832 211 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 DBIP07108 87 aaKnown RBP24.3■■□□□ 1.48
CCM2-211ENST00000478582 UBL4AP11441 157 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 SLC6A2P23975 617 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 CA7P43166 264 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 GZMMP51124 257 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 P2RX1P51575 399 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 SUMO3P55854 103 aaPredicted RBP24.3■■□□□ 1.48
CCM2-211ENST00000478582 KCNJ10P78508 379 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 CDK6Q00534 326 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 RABL3Q5HYI8 236 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 REEP3Q6NUK4 255 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 MYO7BQ6PIF6 2116 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 YRDCQ86U90 279 aaKnown RBP24.3■■□□□ 1.48
CCM2-211ENST00000478582 PTOV1Q86YD1 416 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 CMIPQ8IY22 773 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 PEX5LQ8IYB4 626 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 TOR1AIP2Q8NFQ8 470 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 OR14L1PQ8NHC6 308 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 BCAS4Q8TDM0 211 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 SPATA9Q9BWV2 254 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 LAT2Q9GZY6 243 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 EXO5Q9H790 373 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 CARD8Q9Y2G2 431 aa24.3■■□□□ 1.48
CCM2-211ENST00000478582 C5orf58C9J3I9 102 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 NDUFAB1O14561 156 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 OIP5O43482 229 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 SLC19A2O60779 497 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 CSTAP01040 98 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 ETS2P15036 469 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 PGM1P36871 562 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 C8orf82Q6P1X6 216 aaPredicted RBP24.29■■□□□ 1.48
CCM2-211ENST00000478582 CBLN3Q6UW01 205 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 FAM71CQ8NEG0 241 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 OR10A6Q8NH74 314 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 NFKBIDQ8NI38 313 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 FAM57AQ8TBR7 257 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 SARAFQ96BY9 339 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 SH3YL1Q96HL8 342 aaPredicted RBP24.29■■□□□ 1.48
CCM2-211ENST00000478582 HOPXQ9BPY8 73 aaPredicted RBP24.29■■□□□ 1.48
CCM2-211ENST00000478582 SPRR3Q9UBC9 169 aa24.29■■□□□ 1.48
CCM2-211ENST00000478582 UTP20O75691 2785 aaKnown RBP24.29■■□□□ 1.48
CCM2-211ENST00000478582 A0A087WZY1 265 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 C15orf38-AP3S2A0A0A6YYH1 394 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 ZG16O60844 167 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 NID1P14543 1247 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 ABOP16442 354 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 IL7RP16871 459 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 RNF144AP50876 292 aaPredicted RBP24.28■■□□□ 1.48
CCM2-211ENST00000478582 GFRA1P56159 465 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 SKP2Q13309 424 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 SCARB2Q14108 478 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 CYP51A1Q16850 503 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 RPS26P11Q5JNZ5 115 aaPredicted RBP24.28■■□□□ 1.48
CCM2-211ENST00000478582 HIST2H2BCQ6DN03 193 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 VASNQ6EMK4 673 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 ARPINQ7Z6K5 226 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 CALHM3Q86XJ0 350 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 FITM2Q8N6M3 262 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 C11orf65Q8NCR3 313 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 HIPK4Q8NE63 616 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 WDR60Q8WVS4 1066 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 ARSGQ96EG1 525 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 AP3M1Q9Y2T2 418 aa24.28■■□□□ 1.48
CCM2-211ENST00000478582 CCL21O00585 134 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 BCKDKO14874 412 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 ZNHIT1O43257 154 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 DNAJA2O60884 412 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 ACTL6AO96019 429 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 THBS1P07996 1170 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 HK1P19367 917 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 CASP6P55212 293 aa24.27■■□□□ 1.48
CCM2-211ENST00000478582 GTF3C1Q12789 2109 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms