RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 STAB1Q9NY15 2570 aa14.9□□□□□ -0.02
TRIM13-208ENST00000478111 CR1P17927 2039 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 COPEO14579 308 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 HS3ST1O14792 307 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 GCM2O75603 506 aaPredicted RBP14.89□□□□□ -0.03
TRIM13-208ENST00000478111 HMGN2P05204 90 aaKnown RBP14.89□□□□□ -0.03
TRIM13-208ENST00000478111 NEFHP12036 1026 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 BCKDHAP12694 445 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 SERPINB4P48594 390 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 NR1H2P55055 460 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 ZNF117Q03924 483 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 CBLN3Q6UW01 205 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 GABRG1Q8N1C3 465 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 COX18Q8N8Q8 333 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 CCDC63Q8NA47 563 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 LILRB1Q8NHL6 650 aaPredicted RBP14.89□□□□□ -0.03
TRIM13-208ENST00000478111 RNF128Q8TEB7 428 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 TMEM171Q8WVE6 324 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 CDS1Q92903 461 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 ZNF524Q96C55 264 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 KLHL15Q96M94 604 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 MDFIQ99750 246 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 BTBD2Q9BX70 525 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 SRXN1Q9BYN0 137 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 ATP6V1HQ9UI12 483 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 TMED5Q9Y3A6 229 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 PLCE1Q9P212 2302 aa14.89□□□□□ -0.03
TRIM13-208ENST00000478111 TMEM233B4DJY2 109 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 INAFM1C9JVW0 142 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 SCDO00767 359 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 TMCC2O75069 709 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 SOX30O94993 753 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 NTN1O95631 604 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 TUBBP07437 444 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 FGF4P08620 206 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 HPGDP15428 266 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 KRT4P19013 534 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 CARD18P57730 90 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 POU6F2P78424 691 aaPredicted RBP14.88□□□□□ -0.03
TRIM13-208ENST00000478111 FOXF1Q12946 379 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 ZNF239Q16600 458 aaKnown RBP14.88□□□□□ -0.03
TRIM13-208ENST00000478111 PDSS1Q5T2R2 415 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 NUFIP2Q7Z417 695 aaKnown RBP14.88□□□□□ -0.03
TRIM13-208ENST00000478111 C4orf33Q8N1A6 199 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 RAB3IL1Q8TBN0 382 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 ABHD3Q8WU67 409 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 S100PBPQ96BU1 408 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 STACQ99469 402 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 TRMOQ9BU70 441 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 PIGUQ9H490 435 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 FANCFQ9NPI8 374 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 DUSP22Q9NRW4 184 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 GIN1Q9NXP7 522 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 GIMAP2Q9UG22 337 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 ICAM5Q9UMF0 924 aa14.88□□□□□ -0.03
TRIM13-208ENST00000478111 CHD3Q12873 2000 aaKnown RBP14.88□□□□□ -0.03
TRIM13-208ENST00000478111 ALPK2Q86TB3 2170 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 UQCRHLA0A096LP55 91 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 NPIPA5A0A0B4J1W7 369 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 NPIPA7E9PJI5 369 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 TRIM13O60858 407 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 HSPA4LO95757 839 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 CHRNGP07510 517 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 NPIPA8P0DM63 369 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 ME2P23368 584 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 SFTPDP35247 375 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 EIF1P41567 113 aaKnown RBP14.87□□□□□ -0.03
TRIM13-208ENST00000478111 ASMTP46597 345 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 RNF144AP50876 292 aaPredicted RBP14.87□□□□□ -0.03
TRIM13-208ENST00000478111 KRTAP1-1Q07627 177 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 LASP1Q14847 261 aaKnown RBP14.87□□□□□ -0.03
TRIM13-208ENST00000478111 TSC22D1Q15714 1073 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 TOMM34Q15785 309 aaPredicted RBP14.87□□□□□ -0.03
TRIM13-208ENST00000478111 GALNTL6Q49A17 601 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 KLHL26Q53HC5 615 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRIM13-208ENST00000478111 GTF2IRD2BQ6EKJ0 949 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 ADAM5Q6NVV9 412 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 TFAP2EQ6VUC0 442 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 MTERF4Q7Z6M4 381 aaKnown RBP14.87□□□□□ -0.03
TRIM13-208ENST00000478111 GTF2IRD2Q86UP8 949 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 STK32CQ86UX6 486 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 TUSC5Q8IXB3 177 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 LRRN4CLQ8ND94 238 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 OR7A2PQ8NGA2 310 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 FBXO27Q8NI29 283 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 PSMA8Q8TAA3 256 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 PHOSPHO1Q8TCT1 267 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 EPS8L3Q8TE67 593 aaKnown RBP14.87□□□□□ -0.03
TRIM13-208ENST00000478111 AKAP1Q92667 903 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRIM13-208ENST00000478111 CXorf56Q9H5V9 222 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 COQ10BQ9H8M1 238 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 ZCCHC3Q9NUD5 404 aaKnown RBP14.87□□□□□ -0.03
TRIM13-208ENST00000478111 ADAM21Q9UKJ8 722 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 ACTL7BQ9Y614 415 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 KCNE3Q9Y6H6 103 aa14.87□□□□□ -0.03
TRIM13-208ENST00000478111 SMIM23A6NLE4 172 aa14.86□□□□□ -0.03
TRIM13-208ENST00000478111 NPIPB9F8W1W9 429 aa14.86□□□□□ -0.03
TRIM13-208ENST00000478111 ZNF195O14628 629 aa14.86□□□□□ -0.03
TRIM13-208ENST00000478111 PIP5K1BO14986 540 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms