RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 RIT1Q92963 219 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 PIK3IP1Q96FE7 263 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 RBM18Q96H35 190 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 TMEM41AQ96HV5 264 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 VPS39Q96JC1 886 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 UBXN10Q96LJ8 280 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 ELAC2Q9BQ52 826 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 SFXN3Q9BWM7 321 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 OR2B2Q9GZK3 357 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 DDX47Q9H0S4 455 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 OPN3Q9H1Y3 402 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 ANKRA2Q9H9E1 313 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 PPANQ9NQ55 473 aaKnown RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF701Q9NV72 531 aaPredicted RBP4.11□□□□□ -1.75
CKS1B-207ENST00000477676 EHD3Q9NZN3 535 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 FBXL2Q9UKC9 423 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 CES1P1Q9UKY3 287 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 GPR45Q9Y5Y3 372 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 WNK2Q9Y3S1 2297 aa4.11□□□□□ -1.75
CKS1B-207ENST00000477676 IQANK1A0A1B0GTG1 560 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 C2orf92A0A1B0GVN3 265 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 SYNDIG1LA6NDD5 238 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 PABPN1LA6NDY0 278 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 OR6C76A6NM76 312 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 E7ESA3 106 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 UBXN8O00124 270 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 TP53I11O14683 189 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 CLGNO14967 610 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 KCNAB3O43448 404 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 CCNT2O60583 730 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 SNX4O95219 450 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 ACTL6AO96019 429 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 SLC35E2BP0CK96 405 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 SLC35E2P0CK97 266 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 PCNAP12004 261 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 CYP4B1P13584 511 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 COX7A2P14406 83 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF708P17019 499 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 TCEA1P23193 301 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 GALNSP34059 522 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 UGT2B10P36537 528 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 CD79BP40259 229 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 CPA2P48052 419 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 PIK3CGP48736 1102 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 FNTAP49354 379 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 SUCLG1P53597 346 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 GAS1P54826 345 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 PLIN5Q00G26 463 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 TBL3Q12788 808 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 DDX39BQ13838 428 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 RCN2Q14257 317 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 HLXQ14774 488 aaPredicted RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 EXOSC7Q15024 291 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 TOMM20Q15388 145 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 GUSBP1Q15486 140 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 ZKSCAN8Q15776 578 aaPredicted RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 TMEM35AQ53FP2 167 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 OR5M10Q6IEU7 315 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 SULT1C3Q6IMI6 304 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 FAM180BQ6P0A1 224 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 MED27Q6P2C8 311 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 TMEM81Q6P7N7 255 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 FRA10AC1Q70Z53 315 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 ISCA2Q86U28 154 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 TAGAPQ8N103 731 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 TXLNBQ8N3L3 684 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 ZCCHC7Q8N3Z6 543 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 TRIM58Q8NG06 486 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 LILRB1Q8NHL6 650 aaPredicted RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 UBTD2Q8WUN7 234 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 RNF138Q8WVD3 245 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 FIG4Q92562 907 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 EXT2Q93063 718 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 PIGTQ969N2 578 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 RGMAQ96B86 450 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 OMA1Q96E52 524 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 LRRC46Q96FV0 321 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 CMTM7Q96FZ5 175 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 ZC3HAV1LQ96H79 300 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 ZFP3Q96NJ6 502 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 ATOH8Q96SQ7 321 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 SECISBP2Q96T21 854 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 MTERF1Q99551 399 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 CCL19Q99731 98 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 NAT9Q9BTE0 207 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 EFCAB11Q9BUY7 163 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 CAPS2Q9BXY5 557 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 ITPAQ9BY32 194 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 RTN4RQ9BZR6 473 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 RHOJQ9H4E5 214 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 DDX31Q9H8H2 851 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 MAT2BQ9NZL9 334 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 SLC23A1Q9UHI7 598 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF639Q9UID6 485 aa4.1□□□□□ -1.75
CKS1B-207ENST00000477676 EXO1Q9UQ84 846 aaKnown RBP4.1□□□□□ -1.75
CKS1B-207ENST00000477676 A0A096LNT2 108 aa4.09□□□□□ -1.75
CKS1B-207ENST00000477676 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.09□□□□□ -1.75
CKS1B-207ENST00000477676 FRG2CA6NGY1 282 aa4.09□□□□□ -1.75
CKS1B-207ENST00000477676 RNF212BA8MTL3 300 aa4.09□□□□□ -1.75
CKS1B-207ENST00000477676 H0Y3Z8 333 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms