RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 GRK6P43250 576 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 GTF2A1P52655 376 aaPredicted RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 STX4Q12846 297 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 RAB39AQ14964 217 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 DCST1Q5T197 706 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 ZNF620Q6ZNG0 422 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 FAM26EQ8N5C1 309 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 NUBPLQ8TB37 319 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 GPR151Q8TDV0 419 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 SLC38A4Q969I6 547 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 RIBC2Q9H4K1 309 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 PARD6AQ9NPB6 346 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 CPED1A4D0V7 1026 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 GKN3PP0CG01 181 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 CCL4P13236 92 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 ETV5P41161 510 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 RBM34P42696 430 aaKnown RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 PSPHP78330 225 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 EMX1Q04741 257 aaPredicted RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 EGR4Q05215 589 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 ZNF155Q12901 538 aaPredicted RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 TRAM2Q15035 370 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 C1orf189Q5VU69 101 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 TMEM236Q5W0B7 351 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 ACSM5Q6NUN0 579 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 TTC33Q6PID6 262 aaPredicted RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 B3GNT6Q6ZMB0 384 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 RNF113BQ8IZP6 322 aaKnown RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 LRRC75AQ8NAA5 344 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 LCORQ96JN0 433 aaPredicted RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 IMMP1LQ96LU5 166 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 PTCHD1Q96NR3 888 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 DACH2Q96NX9 599 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 SLC7A7Q9UM01 511 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 C2orf92A0A1B0GVN3 265 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 KDM4EB2RXH2 506 aaPredicted RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 SOCS6O14544 535 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 CHP2O43745 196 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 XPNPEP2O43895 674 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 OR10H2O60403 315 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 SLC2A5P22732 501 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 SMIM11AP58511 58 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 ZBED5Q49AG3 693 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 SYT6Q5T7P8 510 aaPredicted RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 TMEM81Q6P7N7 255 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 ZNF786Q8N393 782 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 ZNF555Q8NEP9 628 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 GGHQ92820 318 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 RBM18Q96H35 190 aaKnown RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 POLDIP3Q9BY77 421 aaKnown RBP11.13□□□□□ -0.63
PRPF39-203ENST00000477626 PRODH2Q9UF12 536 aa11.13□□□□□ -0.63
PRPF39-203ENST00000477626 A0A087WXM4 84 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 SERINC4A6NH21 518 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 CPSF4LA6NMK7 179 aaKnown RBP11.12□□□□□ -0.63
PRPF39-203ENST00000477626 C17orf51A8MQB3 221 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 PCSK6P29122 969 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 DCDP81605 110 aaKnown RBP11.12□□□□□ -0.63
PRPF39-203ENST00000477626 TOP3AQ13472 1001 aaPredicted RBP11.12□□□□□ -0.63
PRPF39-203ENST00000477626 GPR68Q15743 365 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 ATG4DQ86TL0 474 aaPredicted RBP11.12□□□□□ -0.63
PRPF39-203ENST00000477626 PFN4Q8NHR9 129 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 KISS1RQ969F8 398 aaPredicted RBP11.12□□□□□ -0.63
PRPF39-203ENST00000477626 SDCCAG3Q96C92 435 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 G6PC3Q9BUM1 346 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 CDCA4Q9BXL8 241 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 ZNF700Q9H0M5 742 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 TRAPPC13A5PLN9 417 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 EFCAB7A8K855 629 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 PRKYO43930 277 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 NPIPB7O75200 414 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 DCAF7P61962 342 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 SNAP47Q5SQN1 464 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 KIRREL2Q6UWL6 708 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 ATG16L2Q8NAA4 619 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 GTPBP3Q969Y2 492 aaKnown RBP11.12□□□□□ -0.63
PRPF39-203ENST00000477626 LIN37Q96GY3 246 aaPredicted RBP11.12□□□□□ -0.63
PRPF39-203ENST00000477626 MCHR1Q99705 422 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 ZNF559Q9BR84 538 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 TAPBPLQ9BX59 468 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 LHPPQ9H008 270 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 GMPPBQ9Y5P6 360 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 M0R129 80 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 ABCD3P28288 659 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 PIGFQ07326 219 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 ST3GAL3Q11203 375 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 LARS2Q15031 903 aaKnown RBP11.12□□□□□ -0.63
PRPF39-203ENST00000477626 KCTD8Q6ZWB6 473 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 PRSS48Q7RTY5 328 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 SETD9Q8NE22 299 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 LRFN3Q9BTN0 628 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 IL20RAQ9UHF4 553 aa11.12□□□□□ -0.63
PRPF39-203ENST00000477626 IGHV1-45A0A0A0MS14 117 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 ALG1L2C9J202 215 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 H3BSA7 217 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 M0R082 166 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 SURF4O15260 269 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 COX6A1P12074 109 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 FMO3P31513 532 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 ARHGDIAP52565 204 aa11.11□□□□□ -0.63
PRPF39-203ENST00000477626 CTF1Q16619 201 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms