RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 RNLSQ5VYX0 342 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 C11orf88Q6PI97 169 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 SLITRK4Q8IW52 837 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 HS6ST3Q8IZP7 471 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 TTC16Q8NEE8 873 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 GCDHQ92947 438 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 PPM1MQ96MI6 270 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 MTIF3Q9H2K0 278 aaKnown RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 PARPBPQ9NWS1 579 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 COMMD3Q9UBI1 195 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 ARL5AQ9Y689 179 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 A0A1W2PRB8 838 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 A0A1W2PRU2 124 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 NDUFS8O00217 210 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 MBTPS2O43462 519 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 MPZL2O60487 215 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 ITGA10O75578 1167 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 GATBO75879 557 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 VIPP01282 170 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 IFNGR1P15260 489 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 AHCYP23526 432 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 MAP3K8P41279 467 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 RGRP47804 291 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 HCCSP53701 268 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 DIO3P55073 304 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 RHOAP61586 193 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 NFKB2Q00653 900 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 ARHGAP19Q14CB8 494 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 SPHARQ15513 63 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 TMEM240Q5SV17 173 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 DEF8Q6ZN54 512 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 GLT6D1Q7Z4J2 308 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 LRRTM4Q86VH4 590 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 PRSS58Q8IYP2 241 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 MRPL43Q8N983 215 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 CHST14Q8NCH0 376 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 OR4L1Q8NH43 312 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 RPLP0P6Q8NHW5 317 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 C3orf49Q96BT1 292 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 ARL6Q9H0F7 186 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 MTG2Q9H4K7 406 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 MED17Q9NVC6 651 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 NLE1Q9NVX2 485 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 SAMD4AQ9UPU9 718 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 HIST1H2ABP04908 130 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 GAAP10253 952 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 CPN1P15169 458 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 ADCYAP1P18509 176 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 MPIP34949 423 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 MAPK8P45983 427 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 PLK1P53350 603 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 BLOC1S1P78537 153 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 ZXDBP98169 803 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 GAB1Q13480 694 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 NAE1Q13564 534 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 GTF2H3Q13889 308 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 ZNF678Q5SXM1 525 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 PLPP4Q5VZY2 271 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 LINGO4Q6UY18 593 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 ZNF574Q6ZN55 896 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 HIST3H2AQ7L7L0 130 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 CEP97Q8IW35 865 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 ZSCAN1Q8NBB4 408 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 TMEM185AQ8NFB2 350 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 OR52N2Q8NGI0 321 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 HIST1H2ACQ93077 130 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 THAP7Q9BT49 309 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 CHST5Q9GZS9 411 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 NPDC1Q9NQX5 325 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 MS4A12Q9NXJ0 267 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 CXXC1Q9P0U4 656 aaPredicted RBP11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 PPIL1Q9Y3C6 166 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 OR51B4Q9Y5P0 310 aa11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 CFAP20Q9Y6A4 193 aaKnown RBP11.84□□□□□ -0.51
RTFDC1-207ENST00000477573 ANKRD66B4E2M5 251 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 LEFTY2O00292 366 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 CCL16O15467 120 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 OR2A4O95047 310 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 OPN1LWP04000 364 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 MYOGP15173 224 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 UFM1P61960 85 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 MPPED2Q15777 294 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 HECTD2Q5U5R9 776 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 MEDAGQ5VYS4 303 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 NCEH1Q6PIU2 408 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 SSX6Q7RTT6 188 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 LRRC18Q8N456 261 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 SYT14Q8NB59 555 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 OR2L8Q8NGY9 312 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 CDKN2AIPNLQ96HQ2 116 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 TEX37Q96LM6 180 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 OR2A7Q96R45 310 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 GINS4Q9BRT9 223 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 RAD18Q9NS91 495 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF226Q9NYT6 803 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 NLGN3Q9NZ94 848 aa11.83□□□□□ -0.52
RTFDC1-207ENST00000477573 KCTD3Q9Y597 815 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms