RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 SLC16A11Q8NCK7 471 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 OR4K17Q8NGC6 315 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 MRPL38Q96DV4 380 aaKnown RBP13.66□□□□□ -0.22
HDAC6-220ENST00000477528 CDCA4Q9BXL8 241 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 CA14Q9ULX7 337 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 TRAV27A0A087WT01 109 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 LYRM1O43325 122 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 GRPRP30550 384 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 AGBL4Q5VU57 503 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 TCTN3Q6NUS6 607 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 DHRS4L2Q6PKH6 230 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 USP53Q70EK8 1073 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 DTX3Q8N9I9 347 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 OR52I1Q8NGK6 324 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 CCDC107Q8WV48 283 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 B3GNT4Q9C0J1 378 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 SPHK1Q9NYA1 384 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 KCMF1Q9P0J7 381 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 TBC1D29Q9UFV1 150 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 HSPB11Q9Y547 144 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 NTRK2Q16620 822 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 NXNL2Q5VZ03 156 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 GDF7Q7Z4P5 450 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 ASCC1Q8N9N2 400 aaKnown RBP13.66□□□□□ -0.22
HDAC6-220ENST00000477528 C7orf34Q96L11 122 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 BCL2L10Q9HD36 194 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 SH2B3Q9UQQ2 575 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 H3BSH0 61 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 NR2C1P13056 603 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 TP53I3Q53FA7 332 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 PHF19Q5T6S3 580 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 SDR9C7Q8NEX9 313 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 ITFG2Q969R8 447 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 RNF121Q9H920 327 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 SIP14410 1827 aa13.66□□□□□ -0.22
HDAC6-220ENST00000477528 PHYHO14832 338 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 IL7P13232 177 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 GRK5P34947 590 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 PYHIN1Q6K0P9 492 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 MAMDC2Q7Z304 686 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 BCDIN3DQ7Z5W3 292 aaKnown RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 CLDN22Q8N7P3 220 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 OR2A1Q8NGT9 310 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 OR8K3Q8NH51 312 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 TRMT10AQ8TBZ6 339 aaKnown RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 YIPF6Q96EC8 236 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 NARS2Q96I59 477 aaKnown RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 TXNL4BQ9NX01 149 aaKnown RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 TMA7Q9Y2S6 64 aaKnown RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 A0A1W2PQ09 198 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 H3BQ06 376 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 EGFP01133 1207 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 HSD11B1P28845 292 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 C21orf58P58505 322 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 ZNF595Q8IYB9 648 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 ZNF431Q8TF32 576 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 BEX2Q9BXY8 128 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 SEC61A2Q9H9S3 476 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 SIAEQ9HAT2 523 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 SIDT1Q9NXL6 827 aaKnown RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 ZNF226Q9NYT6 803 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 TMPRSS11EQ9UL52 423 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 CBLCQ9ULV8 474 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 METTL21EPA6NDL7 271 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 S1PR1P21453 382 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 CD6P30203 668 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 SLC19A1P41440 591 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 ALG10Q5BKT4 473 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 MANEAQ5SRI9 462 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 TMEM69Q5SWH9 247 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 STEAP3Q658P3 488 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 PRICKLE2Q7Z3G6 844 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 LMAN1LQ9HAT1 526 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 FBXO8Q9NRD0 319 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 RABL2AQ9UBK7 228 aaPredicted RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 ZNF69Q9UC07 566 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 CLEC2DQ9UHP7 191 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 RABL2BQ9UNT1 228 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 MIA3Q5JRA6 1907 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 WDR90Q96KV7 1748 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 TRBV5-3A0A0A0MS03 114 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 RFXAPO00287 272 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 SDC3O75056 442 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 SLC6A8P48029 635 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 LIM2P55344 173 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 SNTB2Q13425 540 aaKnown RBP13.65□□□□□ -0.22
HDAC6-220ENST00000477528 CCINQ13939 588 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 TMEM31Q5JXX7 168 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 AGAP7PQ5VUJ5 663 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 GLT8D1Q68CQ7 371 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 FAM26EQ8N5C1 309 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 ANKRD53Q8N9V6 530 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 OR13C2Q8NGS9 318 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 DYNC2LI1Q8TCX1 351 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 ACTR6Q9GZN1 396 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 FOLH1BQ9HBA9 442 aa13.65□□□□□ -0.22
HDAC6-220ENST00000477528 LCTP09848 1927 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 FMO6PO60774 539 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms