RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 RNF128Q8TEB7 428 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 FAM168AQ92567 244 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 CPNE4Q96A23 557 aaPredicted RBP5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF775Q96BV0 537 aaPredicted RBP5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 ELP4Q96EB1 424 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 C11orf24Q96F05 449 aaPredicted RBP5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 ADGRG7Q96K78 797 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 AMDHD1Q96NU7 426 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 TNFRSF13CQ96RJ3 184 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 PAFAH2Q99487 392 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 LMF2Q9BU23 707 aaKnown RBP5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 SRXN1Q9BYN0 137 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 TRIM2Q9C040 744 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 GLIPR2Q9H4G4 154 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 ACSS3Q9H6R3 686 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 HHATLQ9HCP6 504 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 MED17Q9NVC6 651 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 KLHL13Q9P2N7 655 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 PRSS50Q9UI38 385 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF225Q9UK10 706 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 GRID1Q9ULK0 1009 aa5.93□□□□□ -1.46
RTFDC1-206ENST00000477485 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.93□□□□□ -1.469e-8■■■■■ 29.1
RTFDC1-206ENST00000477485 IGLV3-32A0A0A0MS00 114 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 A0A1W2PR80 420 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 CCT8L1PA6NM43 557 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 SHISA9B4DS77 424 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 ALG1L2C9J202 215 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 M0R1B8 84 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 ADAMDEC1O15204 470 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 PDPK1O15530 556 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 KIAA0513O60268 411 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 LMX1BO60663 402 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 RAD51DO75771 328 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 CD8AP01732 235 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 IGHV3-9P01782 118 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 YES1P07947 543 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 GSTA1P08263 222 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 COL6A2P12110 1019 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 SLC25A16P16260 332 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 GGT1P19440 569 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 HNF1AP20823 631 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 GSTM5P46439 218 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 PRIM2P49643 509 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 SERPINB9P50453 376 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 DSCR9P59020 149 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 IRX1P78414 480 aaPredicted RBP5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 SPOCK1Q08629 439 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 P2RY6Q15077 328 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 TMEM176BQ3YBM2 270 aaPredicted RBP5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 GLE1Q53GS7 698 aaKnown RBP5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 UNC50Q53HI1 259 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF678Q5SXM1 525 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 C8orf74Q6P047 294 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 TRABD2AQ86V40 505 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF100Q8IYN0 542 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 DEPDC4Q8N2C3 294 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 OR2L13Q8N349 312 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 MUC15Q8N387 334 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 CCNYL1Q8N7R7 359 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 NUP43Q8NFH3 380 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 OR4C3Q8NH37 302 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 OR52N5Q8NH56 324 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 ZFP28Q8NHY6 868 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 FBXO27Q8NI29 283 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 POC1BQ8TC44 478 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 CIDECQ96AQ7 238 aaPredicted RBP5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 RADILQ96JH8 1075 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 TMEM237Q96Q45 408 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF382Q96SR6 550 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 SHCBP1LQ9BZQ2 653 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 C12orf65Q9H3J6 166 aaKnown RBP5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 KCNF1Q9H3M0 494 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 MID1IP1Q9NPA3 183 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 CBLN4Q9NTU7 201 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 GIN1Q9NXP7 522 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 NINJ2Q9NZG7 142 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 KCNS2Q9ULS6 477 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 STK38LQ9Y2H1 464 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 ATP23Q9Y6H3 246 aa5.92□□□□□ -1.46
RTFDC1-206ENST00000477485 PLCE1Q9P212 2302 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 NPIPA5A0A0B4J1W7 369 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 A0A1W2PNR3 127 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 CIB4A0PJX0 185 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 TTC36A6NLP5 189 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 NPIPA7E9PJI5 369 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 GTPBP1O00178 669 aaKnown RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ZNF195O14628 629 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 AKAP10O43572 662 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 SEC22BO75396 215 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 LY6HO94772 140 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 KCNK2O95069 426 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ENO1P06733 434 aaKnown RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ALOX5P09917 674 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 NPIPA8P0DM63 369 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 IGHV4-31P0DP07 118 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ACP2P11117 423 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 EFNA1P20827 205 aaPredicted RBP5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ATP6V1C1P21283 382 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 ENPP1P22413 925 aa5.91□□□□□ -1.46
RTFDC1-206ENST00000477485 PSMA4P25789 261 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms