RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 HIF1ANQ9NWT6 349 aa13.39□□□□□ -0.27
SMG5-204ENST00000476954 TAS2R9Q9NYW1 312 aa13.39□□□□□ -0.27
SMG5-204ENST00000476954 RNF14Q9UBS8 474 aa13.39□□□□□ -0.27
SMG5-204ENST00000476954 CCT8L1PA6NM43 557 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 LYNX1G3V0Z9 82 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 RGS14O43566 566 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 PLOD3O60568 738 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 KERAO60938 352 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 AVPP01185 164 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 LTA4HP09960 611 aaKnown RBP13.38□□□□□ -0.27
SMG5-204ENST00000476954 LYNX1P0DP58 116 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 DAOP14920 347 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 ZNF41P51814 821 aaPredicted RBP13.38□□□□□ -0.27
SMG5-204ENST00000476954 FOXF1Q12946 379 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 GTF2H2Q13888 395 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 TMEM176BQ3YBM2 270 aaPredicted RBP13.38□□□□□ -0.27
SMG5-204ENST00000476954 GTF2H2CQ6P1K8 395 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 ZNF100Q8IYN0 542 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 WDR31Q8NA23 367 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMG5-204ENST00000476954 SLC6A7Q99884 636 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 PKP2Q99959 881 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 TIGARQ9NQ88 270 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 FARSBQ9NSD9 589 aaKnown RBP13.38□□□□□ -0.27
SMG5-204ENST00000476954 AHSPQ9NZD4 102 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 MOKQ9UQ07 419 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 ACOT9Q9Y305 439 aa13.38□□□□□ -0.27
SMG5-204ENST00000476954 WNK2Q9Y3S1 2297 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 LOC105371242A0A075B767 164 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 CXorf49A8MYA2 514 aaPredicted RBP13.37□□□□□ -0.27
SMG5-204ENST00000476954 B4DSR2 109 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 OR7A17O14581 309 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 UGDHO60701 494 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 SNUPNO95149 360 aaKnown RBP13.37□□□□□ -0.27
SMG5-204ENST00000476954 ESRRBO95718 433 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 HKR1P10072 659 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 STMN1P16949 149 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 UBA52P62987 128 aaKnown RBP13.37□□□□□ -0.27
SMG5-204ENST00000476954 RASGEF1BQ0VAM2 473 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 FOXL1Q12952 345 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 FRG1Q14331 258 aaKnown RBP13.37□□□□□ -0.27
SMG5-204ENST00000476954 FASTKD3Q14CZ7 662 aaKnown RBP13.37□□□□□ -0.27
SMG5-204ENST00000476954 ZKSCAN8Q15776 578 aaPredicted RBP13.37□□□□□ -0.27
SMG5-204ENST00000476954 GABRA6Q16445 453 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 PFKFB4Q16877 469 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 PRSS53Q2L4Q9 553 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 FRG2Q64ET8 278 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 SPATA19Q7Z5L4 167 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 ZCCHC24Q8N2G6 241 aaKnown RBP13.37□□□□□ -0.27
SMG5-204ENST00000476954 OR4C3Q8NH37 302 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 TMEM186Q96B77 213 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 FRG2BQ96QU4 278 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 JMJD8Q96S16 334 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 FAIM2Q9BWQ8 316 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 CDC42EP4Q9H3Q1 356 aaKnown RBP13.37□□□□□ -0.27
SMG5-204ENST00000476954 UNKLQ9H9P5 680 aaKnown RBP13.37□□□□□ -0.27
SMG5-204ENST00000476954 KLHL9Q9P2J3 617 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 MCM8Q9UJA3 840 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 SLC12A4Q9UP95 1085 aa13.37□□□□□ -0.27
SMG5-204ENST00000476954 A0A1W2PNR3 127 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 IL3P08700 152 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 LINGO3P0C6S8 592 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 ARL1P40616 181 aaPredicted RBP13.36□□□□□ -0.27
SMG5-204ENST00000476954 PRIM2P49643 509 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 RAB10P61026 200 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 SCGB2A2Q13296 93 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 CMC1Q7Z7K0 106 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 PDIK1LQ8N165 341 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 UBE2J2Q8N2K1 259 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 SLC43A2Q8N370 569 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 C1orf52Q8N6N3 182 aaKnown RBP13.36□□□□□ -0.27
SMG5-204ENST00000476954 PIK3R3Q92569 461 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 TAF15Q92804 592 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMG5-204ENST00000476954 GPR22Q99680 433 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 NARFLQ9H6Q4 476 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 NOL11Q9H8H0 719 aaKnown RBP13.36□□□□□ -0.27
SMG5-204ENST00000476954 SENP1Q9P0U3 644 aa13.36□□□□□ -0.27
SMG5-204ENST00000476954 WBP11Q9Y2W2 641 aaKnown RBP13.36□□□□□ -0.27
SMG5-204ENST00000476954 ALG1L2C9J202 215 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 ZNF195O14628 629 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 OXSR1O95747 527 aaPredicted RBP13.35□□□□□ -0.27
SMG5-204ENST00000476954 IFNGR1P15260 489 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 SERPINF1P36955 418 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 RIN1Q13671 783 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 PPP1R7Q15435 360 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 C9orf135Q5VTT2 229 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 FBXW9Q5XUX1 488 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 TTC19Q6DKK2 380 aaPredicted RBP13.35□□□□□ -0.27
SMG5-204ENST00000476954 ZAR1Q86SH2 424 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 CARM1Q86X55 608 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 FAM9CQ8IZT9 166 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 FBXO36Q8NEA4 188 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 TOR1AIP2Q8NFQ8 470 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 FBXO27Q8NI29 283 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 ACTRT2Q8TDY3 377 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 MUS81Q96NY9 551 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 LRRC37BQ96QE4 947 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 SAP130Q9H0E3 1048 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 Q9N2J8 555 aa13.35□□□□□ -0.27
SMG5-204ENST00000476954 PPIAL4AQ9Y536 164 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms