RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 PRPF19Q9UMS4 504 aaKnown RBP20.19■□□□□ 0.82
MCF2L2-209ENST00000475664 ZNF232Q9UNY5 417 aa20.19■□□□□ 0.82
MCF2L2-209ENST00000475664 CARD8Q9Y2G2 431 aa20.19■□□□□ 0.82
MCF2L2-209ENST00000475664 CHD6Q8TD26 2715 aa20.19■□□□□ 0.82
MCF2L2-209ENST00000475664 KALRNO60229 2985 aa20.19■□□□□ 0.82
MCF2L2-209ENST00000475664 FREM3P0C091 2139 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 CDHR4A6H8M9 788 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 M0QX08 132 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 GTPBP1O00178 669 aaKnown RBP20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 EBAG9O00559 213 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 TFECO14948 347 aaPredicted RBP20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 SUV39H1O43463 412 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 HCRTR2O43614 444 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 EIF4E2O60573 245 aaKnown RBP20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 SERPINB7O75635 380 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 CBR3O75828 277 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 C1QL1O75973 258 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 MSX1P28360 303 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 PRKAR1BP31321 381 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 MAGEA5P43359 124 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 FXNQ16595 210 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 DNAL1Q4LDG9 190 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 ZNF311Q5JNZ3 666 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 CBLN3Q6UW01 205 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 ARMC8Q8IUR7 673 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 FAM156AQ8NDB6 213 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 TNIP2Q8NFZ5 429 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 B4GALNT2Q8NHY0 566 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 FAR1Q8WVX9 515 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 NR4A3Q92570 626 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 CNOT9Q92600 299 aaKnown RBP20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 TAMM41Q96BW9 452 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 BTBD10Q9BSF8 475 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 LAT2Q9GZY6 243 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 ASF1BQ9NVP2 202 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 QPCTLQ9NXS2 382 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 SEC14L3Q9UDX4 400 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 RALYQ9UKM9 306 aaKnown RBP20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 ICAM5Q9UMF0 924 aa20.18■□□□□ 0.82
MCF2L2-209ENST00000475664 SPENQ96T58 3664 aaKnown RBP20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 GYG2O15488 501 aa20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 UBTFL6P0CB48 400 aaPredicted RBP20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 MST1P26927 711 aa20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 GDF1P27539 372 aa20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 GABPB1Q06547 395 aaPredicted RBP20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 DMTNQ08495 405 aa20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 ZSWIM7Q19AV6 140 aa20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 DHRS4L2Q6PKH6 230 aa20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 ZNF843Q8N446 348 aa20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 KLHDC3Q9BQ90 382 aa20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 EXOSC3Q9NQT5 275 aaKnown RBP20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 OLAHQ9NV23 265 aa20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 RLIMQ9NVW2 624 aa20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 DNAJB12Q9NXW2 375 aaKnown RBP20.17■□□□□ 0.82
MCF2L2-209ENST00000475664 CXCR6O00574 342 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 OPN1SWP03999 348 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 CELA3AP09093 270 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 GGT1P19440 569 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 TCN1P20061 433 aaPredicted RBP20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 KDELR2P33947 212 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 P2RX1P51575 399 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 MLLT10P55197 1068 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 SUMO3P55854 103 aaPredicted RBP20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 CMPK2Q5EBM0 449 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 GRAMD2AQ8IUY3 354 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 CLIP4Q8N3C7 705 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 TOR1AIP2Q8NFQ8 470 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 C1GALT1C1Q96EU7 318 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 SLX1AQ9BQ83 275 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 OR2B2Q9GZK3 357 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 TSPAN10Q9H1Z9 355 aaPredicted RBP20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 AGPAT4Q9NRZ5 378 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 EGFL7Q9UHF1 273 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 SHANK1Q9Y566 2161 aa20.16■□□□□ 0.82
MCF2L2-209ENST00000475664 ANKUB1A6NFN9 424 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 GSTA4O15217 222 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 GMFGO60234 142 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 TPST1O60507 370 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 WISP2O76076 250 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 EPPINO95925 133 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 HPNP05981 417 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 SRD5A2P31213 254 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 RASSF2P50749 326 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 TDGF1P3P51864 188 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 DSCR4P56555 118 aaPredicted RBP20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 GANABQ14697 944 aaKnown RBP20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 EIPR1Q53HC9 387 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 CCDC121Q6ZUS5 278 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 COMTD1Q86VU5 262 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 TMCO5AQ8N6Q1 288 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 SMYD1Q8NB12 490 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 BHLHE22Q8NFJ8 381 aaPredicted RBP20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 OR5W2Q8NH69 310 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 CPT1CQ8TCG5 803 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 FIG4Q92562 907 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 ARSGQ96EG1 525 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 DTNBP1Q96EV8 351 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 PINK1Q9BXM7 581 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 PTGES2Q9H7Z7 377 aa20.15■□□□□ 0.82
MCF2L2-209ENST00000475664 MRPS18CQ9Y3D5 142 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms