RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 RFPL3SP0C7P2 107 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 FAM58BPP0C7Q3 252 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PABPC4LP0CB38 370 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 PEPDP12955 493 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 GFAPP14136 432 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 CPMP14384 443 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 POU2F1P14859 743 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PAX1P15863 534 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 DDX5P17844 614 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 CD53P19397 219 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 CSNK2A2P19784 350 aaPredicted RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 CD22P20273 847 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 NT5EP21589 574 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 CRYGSP22914 178 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ABCD3P28288 659 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PTPN6P29350 595 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 IL12BP29460 328 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 SRD5A2P31213 254 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 CD79BP40259 229 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ARL1P40616 181 aaPredicted RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 CASP3P42574 277 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PAFAH1B1P43034 410 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 KCNJ5P48544 419 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 TRPC1P48995 793 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 NR0B1P51843 470 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 AGFG1P52594 562 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 ZNF134P52741 427 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ARFIP2P53365 341 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 MAPK12P53778 367 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ALDH18A1P54886 795 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 PROK1P58294 105 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 TAS2R39P59534 338 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 TIAL1Q01085 375 aaKnown RBP eCLIP3.16□□□□□ -1.9
XRN1-209ENST00000472625 DMTNQ08495 405 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 FUT7Q11130 342 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PDIA2Q13087 525 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 IFT88Q13099 833 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 DDX39BQ13838 428 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 GALEQ14376 348 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ZNHIT3Q15649 155 aaPredicted RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 ZKSCAN8Q15776 578 aaPredicted RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 ACKR1Q16570 336 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 GGTA1PQ4G0N0 100 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 BEX5Q5H9J7 111 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 GRTP1Q5TC63 336 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PODNL1Q6PEZ8 512 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ANGPTL8Q6UXH0 198 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ZNF793Q6ZN11 406 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 C16orf47Q6ZP98 133 aaPredicted RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 PLEKHM3Q6ZWE6 761 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 YTHDF3Q7Z739 585 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 LUZP2Q86TE4 346 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 EXOC3L1Q86VI1 746 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PLCZ1Q86YW0 608 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 LIX1LQ8IVB5 337 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ZBED8Q8IZ13 594 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 NAXEQ8NCW5 288 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 FBXO36Q8NEA4 188 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 FAM83FQ8NEG4 500 aaPredicted RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 OR4K17Q8NGC6 315 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 OR4K14Q8NGD5 310 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 TRPC4APQ8TEL6 797 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PYROXD1Q8WU10 500 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 EXT2Q93063 718 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 RFKQ969G6 155 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ATP6V1E2Q96A05 226 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ANKRD9Q96BM1 317 aaPredicted RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 ARSGQ96EG1 525 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 TRMT61AQ96FX7 289 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 WDYHV1Q96HA8 205 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 CAPZA3Q96KX2 299 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 UBXN10Q96LJ8 280 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 SFXN2Q96NB2 322 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 COL21A1Q96P44 957 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 FAM111AQ96PZ2 611 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 RBBP8Q99708 897 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PIGQQ9BRB3 760 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 AIFM2Q9BRQ8 373 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 TMEM79Q9BSE2 394 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 OR2B2Q9GZK3 357 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ELOVL6Q9H5J4 265 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 DDX31Q9H8H2 851 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 LIN28AQ9H9Z2 209 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 LRTM1Q9HBL6 345 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 SDHAF3Q9NRP4 125 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 GLRX2Q9NS18 164 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PNPOQ9NVS9 261 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 TAS2R10Q9NYW0 307 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ZIM2Q9NZV7 527 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ADAM21Q9UKJ8 722 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 SNX12Q9UMY4 172 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ABCG2Q9UNQ0 655 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 EXO1Q9UQ84 846 aaKnown RBP3.16□□□□□ -1.9
XRN1-209ENST00000472625 STK38LQ9Y2H1 464 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 PPP2R2CQ9Y2T4 447 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 NOX1Q9Y5S8 564 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 WIF1Q9Y5W5 379 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 ZNF780BQ9Y6R6 833 aa3.16□□□□□ -1.9
XRN1-209ENST00000472625 HIVEP2P31629 2446 aa3.15□□□□□ -1.9
XRN1-209ENST00000472625 SCN2AQ99250 2005 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms