RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, human

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-215	ENST00000472096	ITPR2	Q14571	2701 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096		A0A087WZY1	265 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	CCDC154	A6NI56	674 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	SHISA8	B8ZZ34	492 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096		H3BML4	177 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	LINC01387	J3KSC0	135 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	HCRTR2	O43614	444 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	TNFRSF21	O75509	655 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	STX11	O75558	287 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	AGR2	O95994	175 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	AVP	P01185	164 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	IL2RA	P01589	272 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	C1QC	P02747	245 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	OR12D1	P0DN82	309 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	IGFBP2	P18065	325 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	MRPL19	P49406	292 aa	Known RBP	13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	RNF144A	P50876	292 aa	Predicted RBP	13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	ZNF136	P52737	540 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	ZNF117	Q03924	483 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	FUT5	Q11128	374 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	BCL2A1	Q16548	175 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	PLPPR5	Q32ZL2	321 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	KLHL26	Q53HC5	615 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	C16orf62	Q7Z3J2	963 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	UBQLNL	Q8IYU4	475 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	MIER2	Q8N344	545 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	MEIOB	Q8N635	442 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	TRIML2	Q8N7C3	387 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	ZNF614	Q8N883	585 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	C9orf106	Q8NAJ2	232 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	B4GALNT2	Q8NHY0	566 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	PHOSPHO1	Q8TCT1	267 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	RAB8B	Q92930	207 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	KLHDC3	Q9BQ90	382 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	NMUR2	Q9GZQ4	415 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	ACBD3	Q9H3P7	528 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	MED17	Q9NVC6	651 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	EXD2	Q9NVH0	621 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	ZNF446	Q9NWS9	450 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	ZNF337	Q9Y3M9	751 aa		13.6	□□□□□ -0.23
CALD1-215	ENST00000472096	C7orf72	A4D263	438 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096		H3BNH8	94 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	RFXANK	O14593	260 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	DVL2	O14641	736 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	OIP5	O43482	229 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	KIAA0513	O60268	411 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	GSN	P06396	782 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	PRF1	P14222	555 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	IDH3A	P50213	366 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	ZNF41	P51814	821 aa	Predicted RBP	13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	POLR2J	P52435	117 aa	Known RBP	13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	AQP5	P55064	265 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	STX1B	P61266	288 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	TIGD2	Q4W5G0	525 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	PDZK1	Q5T2W1	519 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	ATAD3B	Q5T9A4	648 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	POMZP3	Q6PJE2	187 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	PLXDC2	Q6UX71	529 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	MEX3B	Q6ZN04	569 aa	Known RBP	13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	MSANTD1	Q6ZTZ1	278 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	OLIG3	Q7RTU3	272 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	RNF130	Q86XS8	419 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	ZBTB8A	Q96BR9	441 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	NPAS1	Q99742	590 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	SPOCK3	Q9BQ16	436 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	TREX2	Q9BQ50	279 aa	Predicted RBP	13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	CCDC28B	Q9BUN5	200 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	TRIM8	Q9BZR9	551 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	DTNA	Q9Y4J8	743 aa		13.59	□□□□□ -0.23
CALD1-215	ENST00000472096	CENPVL1	A0A0U1RR11	272 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	FAM234B	A2RU67	622 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	HMGN4	O00479	90 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	SEC14L5	O43304	696 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	FCMR	O60667	390 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	GUSB	P08236	651 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	BMP5	P22003	454 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	SUCLG1	P53597	346 aa	Known RBP	13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	SUMO3	P55854	103 aa	Predicted RBP	13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	CLDN15	P56746	228 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	TXNL4A	P83876	142 aa	Known RBP	13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	GPR68	Q15743	365 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	ZNF141	Q15928	474 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	NDUFAF6	Q330K2	333 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	TYW3	Q6IPR3	259 aa	Known RBP	13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	CBLN3	Q6UW01	205 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	ZNF621	Q6ZSS3	439 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	GRAMD2A	Q8IUY3	354 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	MCEMP1	Q8IX19	187 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	XAGE5	Q8WWM1	108 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	SMPDL3B	Q92485	455 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	ROPN1L	Q96C74	230 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	ZFP3	Q96NJ6	502 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	TM9SF2	Q99805	663 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	RUBCNL	Q9H714	662 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	RMND5A	Q9H871	391 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	POLE3	Q9NRF9	147 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	SLC6A13	Q9NSD5	602 aa		13.58	□□□□□ -0.24
CALD1-215	ENST00000472096	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms