RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CSTAP01040 98 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 RNF224P0DH78 156 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 PEPDP12955 493 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 ZNF17P17021 662 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 GPX2P18283 190 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 DRD4P21917 467 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 LHX2P50458 406 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 ZNF41P51814 821 aaPredicted RBP13.84□□□□□ -0.19
SDC3-203ENST00000471567 CRISP3P54108 245 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 GYS2P54840 703 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 GNGT1P63211 74 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 ADORA2A-AS1P86434 159 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 NFYCQ13952 458 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 FGFBP1Q14512 234 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 MAPK11Q15759 364 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 MAPK14Q16539 360 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 RUNDC3AQ59EK9 446 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 DCST1Q5T197 706 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 C1orf185Q5T7R7 199 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 PRAMEF8Q5VWM4 474 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 PRAMEF7Q5VXH5 474 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 RAET1LQ5VY80 246 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 RTL6Q6ICC9 239 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 XKRXQ6PP77 449 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 ARSKQ6UWY0 536 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 B3GNT6Q6ZMB0 384 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 CPLX4Q7Z7G2 160 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 DHDDSQ86SQ9 333 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 CMIPQ8IY22 773 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 ZNF808Q8N4W9 903 aaPredicted RBP13.84□□□□□ -0.19
SDC3-203ENST00000471567 METTL25Q8N6Q8 603 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 ZPLD1Q8TCW7 415 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 SLC38A5Q8WUX1 472 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 ZG16BQ96DA0 208 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 ARSGQ96EG1 525 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 PSMG3-AS1Q96PY0 264 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 CGREF1Q99674 301 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 A4GALTQ9NPC4 353 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 MED17Q9NVC6 651 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 CAMK2AQ9UQM7 478 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 CARD8Q9Y2G2 431 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 L3MBTL1Q9Y468 752 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 FAM215AQ9Y5M1 114 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 CAPN7Q9Y6W3 813 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 DOPEY1Q5JWR5 2465 aa13.84□□□□□ -0.19
SDC3-203ENST00000471567 PCNX3Q9H6A9 2034 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 A0A0G2JPF8 293 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 CENPVL1A0A0U1RR11 272 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 OR2M5A3KFT3 312 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 HNRNPCL2B2RXH8 293 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 HNRNPCL3B7ZW38 293 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 OIP5O43482 229 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 GMFGO60234 142 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 HNRNPCL1O60812 293 aaKnown RBP13.83□□□□□ -0.2
SDC3-203ENST00000471567 DNAJA2O60884 412 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 EPPINO95925 133 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 NPPAP01160 153 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 BCHEP06276 602 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 DBIP07108 87 aaKnown RBP13.83□□□□□ -0.2
SDC3-203ENST00000471567 HNRNPCL4P0DMR1 293 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 ZNF708P17019 499 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 RPS4Y1P22090 263 aaKnown RBP13.83□□□□□ -0.2
SDC3-203ENST00000471567 EIF1P41567 113 aaKnown RBP13.83□□□□□ -0.2
SDC3-203ENST00000471567 KCNJ10P78508 379 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 PLPPR5Q32ZL2 321 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 CBLN3Q6UW01 205 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 MRGPRGQ86SM5 289 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 PEX5LQ8IYB4 626 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 GTPBP8Q8N3Z3 284 aaPredicted RBP13.83□□□□□ -0.2
SDC3-203ENST00000471567 MARVELD2Q8N4S9 558 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 OR5W2Q8NH69 310 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 ITLN2Q8WWU7 325 aaPredicted RBP13.83□□□□□ -0.2
SDC3-203ENST00000471567 RND1Q92730 232 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 ANKRD27Q96NW4 1050 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 CPPED1Q9BRF8 314 aaPredicted RBP13.83□□□□□ -0.2
SDC3-203ENST00000471567 TTYH2Q9BSA4 534 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 RUBCNLQ9H714 662 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 BCL2L10Q9HD36 194 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 STOML1Q9UBI4 398 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 VDAC3Q9Y277 283 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 AP4B1Q9Y6B7 739 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 DSPPQ9NZW4 1301 aa13.83□□□□□ -0.2
SDC3-203ENST00000471567 DOPEY2Q9Y3R5 2298 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 FBP2O00757 339 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 SNX3O60493 162 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 NUDT7P0C024 238 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 LINGO3P0C6S8 592 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 GLI4P10075 376 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 TCEA1P23193 301 aaKnown RBP13.82□□□□□ -0.2
SDC3-203ENST00000471567 ADH6P28332 368 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 PGM1P36871 562 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 STARP49675 285 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 RNF144AP50876 292 aaPredicted RBP13.82□□□□□ -0.2
SDC3-203ENST00000471567 CLDN18P56856 261 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 EEFSECP57772 596 aaKnown RBP13.82□□□□□ -0.2
SDC3-203ENST00000471567 PMPCAQ10713 525 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 SKP2Q13309 424 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 CBFBQ13951 182 aa13.82□□□□□ -0.2
SDC3-203ENST00000471567 CYLC2Q14093 348 aaPredicted RBP13.82□□□□□ -0.2
SDC3-203ENST00000471567 ZSWIM7Q19AV6 140 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms