RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 HIVEP2P31629 2446 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 A0A096LNJ9 63 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 KIR2DL5BA0A0G2JN68 375 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 KIR2DL5BA0A0G2JPC4 375 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 TRBV2A0A0J9YWF9 115 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 IGHV3-64DA0A0J9YX35 117 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 NKX2-6A6NCS4 301 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 GJE1A6NN92 205 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 H3BTX0 84 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 NBR2O15453 112 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 ZBTB14O43829 449 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 HCN1O60741 890 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF780AO75290 641 aaPredicted RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 CXCL10P02778 98 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 CD5P06127 495 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 HMOX1P09601 288 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 ANXA3P12429 323 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 H2AFXP16104 143 aaPredicted RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 GCFC2P16383 781 aaKnown RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 TSPAN8P19075 237 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 TBPP20226 339 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 PTPN6P29350 595 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 PRDX3P30048 256 aaKnown RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 PRDX2P32119 198 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 LONP1P36776 959 aaKnown RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 CSNK1DP48730 415 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 NUMBP49757 651 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 LHX2P50458 406 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 NOVA1P51513 510 aaKnown RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 CCR6P51684 374 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 ST3GAL3Q11203 375 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 MOBPQ13875 183 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 GGTLC2Q14390 218 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 LASP1Q14847 261 aaKnown RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 LY6EQ16553 131 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 OR52W1Q6IF63 320 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 NEK5Q6P3R8 708 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 WDR74Q6RFH5 385 aaPredicted RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 ACP7Q6ZNF0 438 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 Q7L0L9 218 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 ARCQ7LC44 396 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 ABHD12BQ7Z5M8 362 aaPredicted RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 TMEM61Q8N0U2 210 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 KIR2DL5AQ8N109 375 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 MTURNQ8N3F0 131 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 CERS5Q8N5B7 392 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 ZSCAN4Q8NAM6 433 aaPredicted RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 NEK11Q8NG66 645 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF596Q8TC21 504 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 FAM151AQ8WW52 585 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 PIGCQ92535 297 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 UCN3Q969E3 161 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 RAB7BQ96AH8 199 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 UPRTQ96BW1 309 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 RNF185Q96GF1 192 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 ELMO2Q96JJ3 720 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 FAM210BQ96KR6 192 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 OR2M2Q96R28 347 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 NFKBIZQ9BYH8 718 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 PLA2G2FQ9BZM2 168 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 MAGT1Q9H0U3 335 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 SLC25A51Q9H1U9 297 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 PPDPFQ9H3Y8 114 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 TRPV5Q9NQA5 729 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 C1orf123Q9NWV4 160 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 COMMD8Q9NX08 183 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 UTP6Q9NYH9 597 aaKnown RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 BTNL2Q9UIR0 455 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 EIF3LQ9Y262 564 aaKnown RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 TDRKHQ9Y2W6 561 aaKnown RBP0.77□□□□□ -2.29
UBXN4-207ENST00000471246 NEUROG3Q9Y4Z2 214 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 GMPPBQ9Y5P6 360 aa0.77□□□□□ -2.29
UBXN4-207ENST00000471246 CACNA1AO00555 2505 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 GPR179Q6PRD1 2367 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SLIT3O75094 1523 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 RAD54L2Q9Y4B4 1467 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 COL1A2P08123 1366 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 TTC21BQ7Z4L5 1316 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 IGKV1D-17A0A075B6S4 117 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 LRRC30A6NM36 301 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SERPINE3A8MV23 424 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 E9PMD0 336 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SGK494L7N484 410 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 VEGFDO43915 354 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 KINO60870 393 aaKnown RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 STX11O75558 287 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 UFL1O94874 794 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 SLC4A1P02730 911 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 ANXA4P09525 319 aaPredicted RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 GSTT2P0CG29 244 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 GSTT2BP0CG30 244 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 ADRB3P13945 408 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 XRCC1P18887 633 aaPredicted RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 ATP5A1P25705 553 aaKnown RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 PRDX6P30041 224 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 NMT1P30419 496 aaKnown RBP0.76□□□□□ -2.29
UBXN4-207ENST00000471246 ADSSP30520 456 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 AKT2P31751 481 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 EPHX2P34913 555 aa0.76□□□□□ -2.29
UBXN4-207ENST00000471246 COPB2P35606 906 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms