RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 GANABQ14697 944 aaKnown RBP13.88□□□□□ -0.19
COL4A5-203ENST00000470339 TRAM2Q15035 370 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 RFX4Q33E94 735 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 ZNF791Q3KP31 576 aaPredicted RBP13.88□□□□□ -0.19
COL4A5-203ENST00000470339 TBC1D25Q3MII6 688 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 CRTC2Q53ET0 693 aaPredicted RBP13.88□□□□□ -0.19
COL4A5-203ENST00000470339 DCST1Q5T197 706 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 OTUD3Q5T2D3 398 aaPredicted RBP13.88□□□□□ -0.19
COL4A5-203ENST00000470339 ZNF613Q6PF04 617 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 APOOLQ6UXV4 268 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 C16orf47Q6ZP98 133 aaPredicted RBP13.88□□□□□ -0.19
COL4A5-203ENST00000470339 MAGEE2Q8TD90 523 aaPredicted RBP13.88□□□□□ -0.19
COL4A5-203ENST00000470339 SPACA9Q96E40 222 aaPredicted RBP13.88□□□□□ -0.19
COL4A5-203ENST00000470339 FER1L6-AS2Q96M78 137 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 ALPK1Q96QP1 1244 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 SECISBP2Q96T21 854 aaKnown RBP13.88□□□□□ -0.19
COL4A5-203ENST00000470339 TBL1XR1Q9BZK7 514 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 LAT2Q9GZY6 243 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 FLRT3Q9NZU0 649 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 PDP1Q9P0J1 537 aaPredicted RBP13.88□□□□□ -0.19
COL4A5-203ENST00000470339 C15orf41Q9Y2V0 281 aa13.88□□□□□ -0.19
COL4A5-203ENST00000470339 MRPS18BQ9Y676 258 aaKnown RBP13.88□□□□□ -0.19
COL4A5-203ENST00000470339 TRAPPC13A5PLN9 417 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 FAAHO00519 579 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 TP53I11O14683 189 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 NDUFB5O43674 189 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 CCNB2O95067 398 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 GKN3PP0CG01 181 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 PRG2P13727 222 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 ANXA8P13928 327 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 SLC6A8P48029 635 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 SSR4P51571 173 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 RPP38P78345 283 aaKnown RBP13.87□□□□□ -0.19
COL4A5-203ENST00000470339 PPP1R8Q12972 351 aaKnown RBP13.87□□□□□ -0.19
COL4A5-203ENST00000470339 AIMP2Q13155 320 aaKnown RBP13.87□□□□□ -0.19
COL4A5-203ENST00000470339 ATP1A4Q13733 1029 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 TGIF1Q15583 401 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 OR1Q1Q15612 314 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 EXOC3L2Q2M3D2 409 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 CMPK2Q5EBM0 449 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 DCAF10Q5QP82 559 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 FAHD1Q6P587 224 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 TMEM81Q6P7N7 255 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 PLEKHM3Q6ZWE6 761 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 TSPYL5Q86VY4 417 aaPredicted RBP13.87□□□□□ -0.19
COL4A5-203ENST00000470339 OR52J3Q8NH60 311 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 PHOSPHO1Q8TCT1 267 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 ADAMTS16Q8TE57 1224 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 THAP4Q8WY91 577 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 OSBPL11Q9BXB4 747 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 CDCP1Q9H5V8 836 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 TMEM27Q9HBJ8 222 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 ATP13A2Q9NQ11 1180 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 RHCGQ9UBD6 479 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 RAB26Q9ULW5 256 aa13.87□□□□□ -0.19
COL4A5-203ENST00000470339 MAGED1Q9Y5V3 778 aaPredicted RBP13.87□□□□□ -0.19
COL4A5-203ENST00000470339 C7orf72A4D263 438 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 CPSF4LA6NMK7 179 aaKnown RBP13.86□□□□□ -0.19
COL4A5-203ENST00000470339 DLGAP1O14490 977 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 BCAS1O75363 584 aaPredicted RBP13.86□□□□□ -0.19
COL4A5-203ENST00000470339 UBTFL6P0CB48 400 aaPredicted RBP13.86□□□□□ -0.19
COL4A5-203ENST00000470339 UQCRBP14927 111 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 ACADSP16219 412 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 ELAVL4P26378 380 aaKnown RBP13.86□□□□□ -0.19
COL4A5-203ENST00000470339 RAD23AP54725 363 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 FBXW4P57775 412 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 HOXC5Q00444 222 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 EPS8Q12929 822 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 SKP2Q13309 424 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 SNTA1Q13424 505 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 CD226Q15762 336 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 KDM4DQ6B0I6 523 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 GDF7Q7Z4P5 450 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 GPALPP1Q8IXQ4 340 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 HS3ST5Q8IZT8 346 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 SLC7A13Q8TCU3 470 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 GRHL3Q8TE85 626 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 ASB15Q8WXK1 588 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 SLC38A4Q969I6 547 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 SLC41A3Q96GZ6 507 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 BARD1Q99728 777 aaKnown RBP13.86□□□□□ -0.19
COL4A5-203ENST00000470339 SMURF2Q9HAU4 748 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 SDHAF3Q9NRP4 125 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 MAN2C1Q9NTJ4 1040 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 SMPD3Q9NY59 655 aaPredicted RBP13.86□□□□□ -0.19
COL4A5-203ENST00000470339 ORC6Q9Y5N6 252 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 CPAMD8Q8IZJ3 1885 aa13.86□□□□□ -0.19
COL4A5-203ENST00000470339 TRBV4-1A0A0J9YWV2 114 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 SH3PXD2BA1X283 911 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 ANGPTL1O95841 491 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 LINGO3P0C6S8 592 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 PRKACGP22612 351 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 HTR2AP28223 471 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 SOX3P41225 446 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 RRADP55042 308 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 SOX8P57073 446 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 COPZ1P61923 177 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 C17orf67Q0P5P2 114 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 MEP1AQ16819 746 aa13.85□□□□□ -0.19
COL4A5-203ENST00000470339 NHSL2Q5HYW2 709 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms