RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ADAMDEC1O15204 470 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 ECI2O75521 394 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 KLHL18O94889 574 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 FGF19O95750 216 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 OTCP00480 354 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 DUX4L2P0CJ85 424 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 DUX4L3P0CJ86 424 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 DUX4L4P0CJ87 422 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 DUX4L5P0CJ88 424 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 DUX4L6P0CJ89 424 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 DUX4L7P0CJ90 424 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 CTHP32929 405 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 ADRA1AP35348 466 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 CDKN2CP42773 168 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 CLN3Q13286 438 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 ELAVL3Q14576 367 aaKnown RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 CST6Q15828 149 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 TIMM50Q3ZCQ8 353 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 LAIR1Q6GTX8 287 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 CCDC54Q8NEL0 328 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 OR52B6Q8NGF0 335 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 FOXRED1Q96CU9 486 aaPredicted RBP9.32□□□□□ -0.92
NUP50-214ENST00000469163 TMEM74Q96NL1 305 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 MARVELD1Q9BSK0 173 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 EBPLQ9BY08 206 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 TMPRSS5Q9H3S3 457 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 BEX1Q9HBH7 125 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 DUX4Q9UBX2 424 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 TP53TG5Q9Y2B4 290 aa9.32□□□□□ -0.92
NUP50-214ENST00000469163 BPTFQ12830 3046 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 CKAP5Q14008 2032 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 TANC1Q9C0D5 1861 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 A0A075B6Q4 140 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 MYO1GB0I1T2 1018 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 ANKRD28O15084 1053 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 HPRP00739 348 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 MYF5P13349 255 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 CD46P15529 392 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 TYRP1P17643 537 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 RPS19P39019 145 aaKnown RBP9.31□□□□□ -0.92
NUP50-214ENST00000469163 TNFRSF9Q07011 255 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 TMEM115Q12893 351 aaPredicted RBP9.31□□□□□ -0.92
NUP50-214ENST00000469163 IL18Q14116 193 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 TTLL9Q3SXZ7 439 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 OR5M10Q6IEU7 315 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 TMEM207Q6UWW9 146 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 TMEM17Q86X19 198 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 VRK3Q8IV63 474 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 MARS2Q96GW9 593 aaKnown RBP9.31□□□□□ -0.92
NUP50-214ENST00000469163 GPR78Q96P69 363 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 LGR4Q9BXB1 951 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 C2orf42Q9NWW7 574 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 NLGN3Q9NZ94 848 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 LHX6Q9UPM6 363 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 RNF24Q9Y225 148 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 MTCH2Q9Y6C9 303 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 NUDT19A8MXV4 375 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 G3V2L1 256 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 CDRT1O95170 752 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 CD2P06729 351 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 CTSEP14091 401 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 SLC6A2P23975 617 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 RGS6P49758 472 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 HABP2Q14520 560 aaPredicted RBP9.31□□□□□ -0.92
NUP50-214ENST00000469163 TSTQ16762 297 aaKnown RBP9.31□□□□□ -0.92
NUP50-214ENST00000469163 CCSMST1Q4G0I0 132 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 LBHQ53QV2 105 aaPredicted RBP9.31□□□□□ -0.92
NUP50-214ENST00000469163 SPNS3Q6ZMD2 512 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 ASB18Q6ZVZ8 466 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 ERN2Q76MJ5 926 aaKnown RBP9.31□□□□□ -0.92
NUP50-214ENST00000469163 TSTD1Q8NFU3 115 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 STAG3L4Q8TBR4 150 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 TMEM43Q9BTV4 400 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 PRSS16Q9NQE7 514 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 DOCK9Q9BZ29 2069 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 GREB1Q4ZG55 1949 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 LOC285095A0A1B0GVY8 99 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 GSAPA4D1B5 854 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 CASC3O15234 703 aaKnown RBP9.31□□□□□ -0.92
NUP50-214ENST00000469163 ZNF35P13682 527 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 S100A2P29034 98 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 ELP6Q0PNE2 266 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 GUCA2BQ16661 112 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 HNRNPA1L2Q32P51 320 aaKnown RBP9.31□□□□□ -0.92
NUP50-214ENST00000469163 TMPRSS11BQ86T26 416 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 FAM129CQ86XR2 697 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 FUNDC1Q8IVP5 155 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 SLC44A3Q8N4M1 653 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 ZBTB2Q8N680 514 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 AP3S1Q92572 193 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 ZNF599Q96NL3 588 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 FAM117AQ9C073 453 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 IPPKQ9H8X2 491 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 POMT2Q9UKY4 750 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 NUBP2Q9Y5Y2 271 aa9.31□□□□□ -0.92
NUP50-214ENST00000469163 A8MT66 165 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 UPK1AO00322 258 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 SDHBP21912 280 aa9.3□□□□□ -0.92
NUP50-214ENST00000469163 VIPR1P32241 457 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms