RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 LRFN3Q9BTN0 628 aa8.69□□□□□ -1.02
PRPF3-202ENST00000467329 POLR1BQ9H9Y6 1135 aa8.69□□□□□ -1.02
PRPF3-202ENST00000467329 B3GALT1Q9Y5Z6 326 aa8.69□□□□□ -1.02
PRPF3-202ENST00000467329 COL6A3P12111 3177 aa8.69□□□□□ -1.02
PRPF3-202ENST00000467329 KLF4O43474 513 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 MRPS14O60783 128 aaKnown RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 KLF7O75840 302 aaPredicted RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 ZFAND5O76080 213 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 UMODP07911 640 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 UBL4AP11441 157 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 MMP11P24347 488 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 FOLR3P41439 243 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 HLCSP50747 726 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 NR0B1P51843 470 aaKnown RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 MAD2L1BPQ15013 274 aaPredicted RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 PCOLCEQ15113 449 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 TRIP6Q15654 476 aaKnown RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 SLX4IPQ5VYV7 408 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 RASSF6Q6ZTQ3 369 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 ZER1Q7Z7L7 766 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 OR4C3Q8NH37 302 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 NACC2Q96BF6 587 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 EFHD2Q96C19 240 aaPredicted RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 LAT2Q9GZY6 243 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 PISDQ9UG56 409 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 PADI1Q9ULC6 663 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 PTRH2Q9Y3E5 179 aaKnown RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 PCDHGA6Q9Y5G7 932 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 ALG1L2C9J202 215 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 GDF9O60383 454 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 EIF4E2O60573 245 aaKnown RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 BCAS1O75363 584 aaPredicted RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 REM1O75628 298 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 PPM1BO75688 479 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 HPGDP15428 266 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 ITIH1P19827 911 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 ABCD3P28288 659 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 OMPP47874 163 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 IL5RAQ01344 420 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 TARDBPQ13148 414 aaKnown RBP eCLIP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 SKP2Q13309 424 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 CDK5R2Q13319 367 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 CTU2Q2VPK5 515 aaKnown RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 RRM2BQ7LG56 351 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 MISPQ8IVT2 679 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 ZNF614Q8N883 585 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 M1APQ8TC57 530 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 RNF138Q8WVD3 245 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 DNAJA4Q8WW22 397 aaPredicted RBP8.68□□□□□ -1.02
PRPF3-202ENST00000467329 ZNF426Q9BUY5 554 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 C12orf10Q9HB07 376 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 SLC25A19Q9HC21 320 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 SLC7A7Q9UM01 511 aa8.68□□□□□ -1.02
PRPF3-202ENST00000467329 IGHV1-45A0A0A0MS14 117 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 IGHV3-20A0A0C4DH32 117 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 TRBV11-1A0A0K0K1C0 115 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 A0A1B0GWA3 101 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 AGRPO00253 132 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 SMNDC1O75940 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
PRPF3-202ENST00000467329 OR6B1O95007 311 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 NADKO95544 446 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-202ENST00000467329 IGF2P01344 180 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 TP53P04637 393 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-202ENST00000467329 GKN3PP0CG01 181 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 CHMP24386 653 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 RPL5P46777 297 aaKnown RBP8.67□□□□□ -1.02
PRPF3-202ENST00000467329 NR1H2P55055 460 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 CTBP2P56545 445 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 CDC42P60953 191 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 HOXC5Q00444 222 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 PRKCDQ05655 676 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 HES3Q5TGS1 186 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 BROXQ5VW32 411 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 C12orf73Q69YU5 71 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 ULK3Q6PHR2 472 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 NKAIN4Q8IVV8 208 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 SLC43A2Q8N370 569 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 ESX1Q8N693 406 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 LMF1Q96S06 567 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 PRR14Q9BWN1 585 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 FLRT3Q9NZU0 649 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 SELENONQ9NZV5 590 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 NDUFA13Q9P0J0 144 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 NTNG1Q9Y2I2 539 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 ZNF264O43296 627 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 FADS1O60427 444 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 ICOSLGO75144 302 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 SEC24DO94855 1032 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-202ENST00000467329 CLPTM1O96005 669 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 COX6A1P12074 109 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 CRHBPP24387 322 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 EPHA2P29317 976 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 TMED10P49755 219 aaKnown RBP8.67□□□□□ -1.02
PRPF3-202ENST00000467329 PLAG1Q6DJT9 500 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 LAIR2Q6ISS4 152 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 ZNF773Q6PK81 442 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 LINC00114Q6XXX2 140 aa8.67□□□□□ -1.02
PRPF3-202ENST00000467329 NUP54Q7Z3B4 507 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms