RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 C12orf66Q96MD2 445 aa16.86■□□□□ 0.29
SNAPC3-205ENST00000467062 RSPH9Q9H1X1 276 aaPredicted RBP16.86■□□□□ 0.29
SNAPC3-205ENST00000467062 EQTNQ9NQ60 294 aa16.86■□□□□ 0.29
SNAPC3-205ENST00000467062 CLCA2Q9UQC9 943 aa16.86■□□□□ 0.29
SNAPC3-205ENST00000467062 DTX4Q9Y2E6 619 aa16.86■□□□□ 0.29
SNAPC3-205ENST00000467062 SLC9A8Q9Y2E8 581 aa16.86■□□□□ 0.29
SNAPC3-205ENST00000467062 SERPIND1P05546 499 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 ILKQ13418 452 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 PUM1Q14671 1186 aaKnown RBP eCLIP16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 LYPD4Q6UWN0 246 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 CELF5Q8N6W0 485 aaKnown RBP16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 OR56B4Q8NH76 319 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 OR8D1Q8WZ84 308 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 ZNF251Q9BRH9 671 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 YIPF4Q9BSR8 244 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 OSGEPL1Q9H4B0 414 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 GSN-AS1Q9NRJ2 163 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 DEC1Q9P2X7 70 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 MBD2Q9UBB5 411 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 LTBP2Q14767 1821 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 PLXNA2O75051 1894 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 TBC1D3BA6NDS4 549 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 FOXE1O00358 373 aaPredicted RBP16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 PLPP1O14494 284 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 KIAA0355O15063 1070 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 TFPIP10646 304 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 PRKAR1BP31321 381 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 ERVK-25P63136 954 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 HSPB3Q12988 150 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 ZSWIM7Q19AV6 140 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 FAM78AQ5JUQ0 283 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 C12orf73Q69YU5 71 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 SZRD1Q7Z422 152 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 MARCH9Q86YJ5 346 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 TCEANCQ8N8B7 351 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 AMER3Q8N944 861 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 OR1S1Q8NH92 325 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 WFDC6Q9BQY6 131 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 OR6C2Q9NZP2 312 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 OR1A2Q9Y585 309 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 PTPRSQ13332 1948 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 TRIOO75962 3097 aa16.85■□□□□ 0.29
SNAPC3-205ENST00000467062 TMEM129A0AVI4 362 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 TRABD2BA6NFA1 517 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 TFP02787 698 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 EPHX1P07099 455 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 FEN1P39748 380 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 XCR1P46094 333 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 UNC5DQ6UXZ4 953 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 TOMM5Q8N4H5 51 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 OR2L2Q8NH16 312 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 GATAD2BQ8WXI9 593 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 TCEAL3Q969E4 200 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 OTUB2Q96DC9 234 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 PDCD10Q9BUL8 212 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 TINAGL1Q9GZM7 467 aaPredicted RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 SAP130Q9H0E3 1048 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 OR52A5Q9H2C5 316 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 PRKAG2Q9UGJ0 569 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 ATG2BQ96BY7 2078 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 IGLON5A6NGN9 336 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 ADH1CP00326 375 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 ADAP00813 363 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 HLA-DPB1P04440 258 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 S100A9P06702 114 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 IGFBP1P08833 259 aaPredicted RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 SMIM6P0DI80 62 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 BTF3P20290 206 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 HLXQ14774 488 aaPredicted RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 SMAD2Q15796 467 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 CEACAM20Q6UY09 585 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 RBM45Q8IUH3 476 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 ETFBKMTQ8IXQ9 262 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 KLHDC8AQ8IYD2 350 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 ZNF527Q8NB42 609 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 GEMIN6Q8WXD5 167 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 ZCCHC2Q9C0B9 1178 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 RNF32Q9H0A6 362 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 HELZP42694 1942 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 TRBC2A0A5B9 178 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 IRGMA1A4Y4 181 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 GRXCR1A8MXD5 290 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 TEX46H3BTG2 121 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 P2RY2P41231 377 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 SRP9P49458 86 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 MC2RQ01718 297 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 MYO9BQ13459 2157 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 Q3ZCU0 254 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 OR2G6Q5TZ20 316 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 GPR135Q8IZ08 494 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 GOT1L1Q8NHS2 421 aaPredicted RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 SFT2D1Q8WV19 159 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 EXOSC8Q96B26 276 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 TMPRSS13Q9BYE2 586 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 XKR8Q9H6D3 395 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 TESQ9UGI8 421 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 PCOLCE2Q9UKZ9 415 aa16.84■□□□□ 0.29
SNAPC3-205ENST00000467062 NUMA1Q14980 2115 aa16.83■□□□□ 0.29
SNAPC3-205ENST00000467062 MCRIP1C9JLW8 97 aa16.83■□□□□ 0.28
SNAPC3-205ENST00000467062 LRRTM2O43300 516 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms