RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, human

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT4-208	ENST00000465721	CPNE4	Q96A23	557 aa	Predicted RBP	10.43	□□□□□ -0.74
CNOT4-208	ENST00000465721	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.43	□□□□□ -0.74
CNOT4-208	ENST00000465721	TNFRSF13C	Q96RJ3	184 aa		10.43	□□□□□ -0.74
CNOT4-208	ENST00000465721	PAFAH2	Q99487	392 aa		10.43	□□□□□ -0.74
CNOT4-208	ENST00000465721	RHNO1	Q9BSD3	238 aa		10.43	□□□□□ -0.74
CNOT4-208	ENST00000465721	C19orf24	Q9BVV8	132 aa		10.43	□□□□□ -0.74
CNOT4-208	ENST00000465721	COQ10B	Q9H8M1	238 aa		10.43	□□□□□ -0.74
CNOT4-208	ENST00000465721	GP6	Q9HCN6	339 aa		10.43	□□□□□ -0.74
CNOT4-208	ENST00000465721	CISD1	Q9NZ45	108 aa	Known RBP	10.43	□□□□□ -0.74
CNOT4-208	ENST00000465721	MGAM2	Q2M2H8	2515 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	GOLGA8Q	A0A0J9YX86	632 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	SERTM1	A2A2V5	107 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	GOLGA8O	A6NCC3	632 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	GOLGA8N	F8WBI6	632 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	GOLGA8R	I6L899	631 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	EFNA2	O43921	213 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	ENO1	P06733	434 aa	Known RBP	10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	FES	P07332	822 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	PABPC4L	P0CB38	370 aa	Known RBP	10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	ACP2	P11117	423 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	ZNF16	P17020	682 aa	Predicted RBP	10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	PTN	P21246	168 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	ELK4	P28324	431 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	PRIM2	P49643	509 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	SERPINB9	P50453	376 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	NUDT6	P53370	316 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	MANF	P55145	182 aa	Known RBP	10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	LCP2	Q13094	533 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	CD226	Q15762	336 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	PDSS1	Q5T2R2	415 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	CLEC2A	Q6UVW9	174 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	FCRLA	Q7L513	359 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	ZNF551	Q7Z340	670 aa	Predicted RBP	10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	LILRA2	Q8N149	483 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	FBXO30	Q8TB52	745 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	GPR151	Q8TDV0	419 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	DCAKD	Q8WVC6	231 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	GIMAP5	Q96F15	307 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	USB1	Q9BQ65	265 aa	Known RBP	10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	PRR14	Q9BWN1	585 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	CACNG6	Q9BXT2	260 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	AMBRA1	Q9C0C7	1298 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	HHATL	Q9HCP6	504 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	FAIM	Q9NVQ4	179 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	LPAR3	Q9UBY5	353 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	ING1	Q9UK53	422 aa	Predicted RBP	10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	POLR3H	Q9Y535	204 aa	Predicted RBP	10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	TIMM22	Q9Y584	194 aa		10.42	□□□□□ -0.74
CNOT4-208	ENST00000465721	MEGF8	Q7Z7M0	2845 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	TRIM49D1	C9J1S8	452 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	ABCD4	O14678	606 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	DLX3	O60479	287 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	LYZL6	O75951	148 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	KCNK2	O95069	426 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	IGHV4-31	P0DP07	118 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	COX5A	P20674	150 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	EDNRA	P25101	427 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	THBS2	P35442	1172 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	FOXA1	P55317	472 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	PKNOX1	P55347	436 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	SRSF2	Q01130	221 aa	Known RBP	10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	HSPB3	Q12988	150 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	PPA1	Q15181	289 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721		Q6ZT83	130 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	ZNF525	Q8N782	197 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	B4GALNT2	Q8NHY0	566 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	FAM110B	Q8TC76	370 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	BEX2	Q9BXY8	128 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	CXorf36	Q9H7Y0	433 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	BCO1	Q9HAY6	547 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	PRSS50	Q9UI38	385 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721	ZNF180	Q9UJW8	692 aa		10.41	□□□□□ -0.74
CNOT4-208	ENST00000465721		A0A1W2PQD3	144 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721		E7EQL1	145 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	OIP5	O43482	229 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	PRKD3	O94806	890 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	YES1	P07947	543 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	PRPS2	P11908	318 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	SLC25A16	P16260	332 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	IGFBP5	P24593	272 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	LCN1	P31025	176 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	EIF1	P41567	113 aa	Known RBP	10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	OR3A2	P47893	321 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	DSCR9	P59020	149 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	ZNF117	Q03924	483 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	SPOCK1	Q08629	439 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	STK11	Q15831	433 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	DUSP5	Q16690	384 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	VPS26B	Q4G0F5	336 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	SPDYA	Q5MJ70	313 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	EXOSC6	Q5RKV6	272 aa	Known RBP	10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	TEX35	Q5T0J7	233 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	AGAP6	Q5VW22	663 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	IKBIP	Q70UQ0	350 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	RELL1	Q8IUW5	271 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	MISP	Q8IVT2	679 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	ARIH2OS	Q8N7S6	290 aa		10.4	□□□□□ -0.74
CNOT4-208	ENST00000465721	CDRT4	Q8N9R6	151 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms