RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 P2RX1P51575 399 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 CCR4P51679 360 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 NUP107P57740 925 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 PMPCAQ10713 525 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 FGFBP1Q14512 234 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 ZNF630Q2M218 657 aaPredicted RBP10.55□□□□□ -0.72
CUX1-207ENST00000465461 MMEL1Q495T6 779 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 NHSL2Q5HYW2 709 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 C1orf185Q5T7R7 199 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 HIST2H2BCQ6DN03 193 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 RPTNQ6XPR3 784 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 MTERF4Q7Z6M4 381 aaKnown RBP10.55□□□□□ -0.72
CUX1-207ENST00000465461 VRK2Q86Y07 508 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 TREML1Q86YW5 311 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 MISPQ8IVT2 679 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 UBQLNLQ8IYU4 475 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 DPP10Q8N608 796 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 NFKBIDQ8NI38 313 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 POC1BQ8TC44 478 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 SMPDL3BQ92485 455 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 ANKRD27Q96NW4 1050 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 TRIB1Q96RU8 372 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 CGREF1Q99674 301 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 THUMPD3Q9BV44 507 aaKnown RBP10.55□□□□□ -0.72
CUX1-207ENST00000465461 CCDC106Q9BWC9 280 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 NSRP1Q9H0G5 558 aaKnown RBP10.55□□□□□ -0.72
CUX1-207ENST00000465461 TP63Q9H3D4 680 aaPredicted RBP10.55□□□□□ -0.72
CUX1-207ENST00000465461 PIF1Q9H611 641 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 POLE3Q9NRF9 147 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 SUCOQ9UBS9 1254 aaKnown RBP10.55□□□□□ -0.72
CUX1-207ENST00000465461 ICAM5Q9UMF0 924 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 LIPT1Q9Y234 373 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 MRPS18CQ9Y3D5 142 aaKnown RBP10.55□□□□□ -0.72
CUX1-207ENST00000465461 CAPN7Q9Y6W3 813 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 KIAA1549Q9HCM3 1950 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 UBR5O95071 2799 aaPredicted RBP10.54□□□□□ -0.72
CUX1-207ENST00000465461 AGAP5A6NIR3 686 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 E9PLN8 166 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 MRASO14807 208 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 SEC14L5O43304 696 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 CCDC22O60826 627 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 ADAM11O75078 769 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 ACTL6AO96019 429 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 CSTAP01040 98 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 GLI4P10075 376 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 MSX1P28360 303 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 RYKP34925 604 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 LHX2P50458 406 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 ZNF41P51814 821 aaPredicted RBP10.54□□□□□ -0.72
CUX1-207ENST00000465461 SUCLG1P53597 346 aaKnown RBP10.54□□□□□ -0.72
CUX1-207ENST00000465461 CLDN18P56856 261 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 CLDN20P56880 219 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 KCNJ10P78508 379 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 FOXF1Q12946 379 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 CYLC2Q14093 348 aaPredicted RBP10.54□□□□□ -0.72
CUX1-207ENST00000465461 GANABQ14697 944 aaKnown RBP10.54□□□□□ -0.72
CUX1-207ENST00000465461 PLPPR5Q32ZL2 321 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 GCNT6Q5T4J0 391 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 AAGABQ6PD74 315 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 SEM1Q6ZVN7 128 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 MRGPRGQ86SM5 289 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 ULK2Q8IYT8 1036 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 OR52P1PQ8NH57 321 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 GPR119Q8TDV5 335 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 TSPEARQ8WU66 669 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 ITLN2Q8WWU7 325 aaPredicted RBP10.54□□□□□ -0.72
CUX1-207ENST00000465461 CNOT9Q92600 299 aaKnown RBP10.54□□□□□ -0.72
CUX1-207ENST00000465461 RCN3Q96D15 328 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 RNF145Q96MT1 663 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 VKORC1Q9BQB6 163 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 TUBA1CQ9BQE3 449 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 TTYH2Q9BSA4 534 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 PRDM14Q9GZV8 571 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 LAT2Q9GZY6 243 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 TMEM185BQ9H7F4 350 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 MTHFD2LQ9H903 347 aaPredicted RBP10.54□□□□□ -0.72
CUX1-207ENST00000465461 A4GALTQ9NPC4 353 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 RLIMQ9NVW2 624 aa10.54□□□□□ -0.72
CUX1-207ENST00000465461 MYO18BQ8IUG5 2567 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 FIGNL2A6NMB9 653 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 EVPLLA8MZ36 301 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 H0Y3Z8 333 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 AP3D1O14617 1153 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 EFNA2O43921 213 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 EIF4E2O60573 245 aaKnown RBP10.53□□□□□ -0.72
CUX1-207ENST00000465461 TOXO94900 526 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 CLDN1O95832 211 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 GUSBP08236 651 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 LINGO3P0C6S8 592 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 BMP2P12643 396 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 PEPDP12955 493 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 IL7RP16871 459 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 ZNF708P17019 499 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 GPX2P18283 190 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 POU3F2P20265 443 aaPredicted RBP10.53□□□□□ -0.72
CUX1-207ENST00000465461 RPS4Y1P22090 263 aaKnown RBP10.53□□□□□ -0.72
CUX1-207ENST00000465461 CHMP24386 653 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 AQP1P29972 269 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 GCKP35557 465 aa10.53□□□□□ -0.72
CUX1-207ENST00000465461 ADH7P40394 386 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms