RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 AP3M1Q9Y2T2 418 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 ZNF175Q9Y473 711 aa4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 KLF2Q9Y5W3 355 aaPredicted RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 TNRC6AQ8NDV7 1962 aaKnown RBP4.47□□□□□ -1.69
CACNA1C-223ENST00000465278 CNTNAP2Q9UHC6 1331 aa4.46□□□□□ -1.69
CACNA1C-223ENST00000465278 TENM1Q9UKZ4 2725 aa4.46□□□□□ -1.69
CACNA1C-223ENST00000465278 PLXNA2O75051 1894 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 TRPC5OSA6NMA1 111 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 USP27XA6NNY8 438 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 SSX5O60225 188 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 RBBP9O75884 186 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 PTBP3O95758 552 aaKnown RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 TSHBP01222 138 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 UMODP07911 640 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 KRT5P13647 590 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 UCHL3P15374 230 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 PAX1P15863 534 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 HLA-DPA1P20036 260 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 RAB4AP20338 218 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 BMI1P35226 326 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ETV5P41161 510 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 LEPRP48357 1165 aaKnown RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 KLK7P49862 253 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 SUCLG1P53597 346 aaKnown RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ELF3P78545 371 aaPredicted RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 CYP24A1Q07973 514 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ACSM1Q08AH1 577 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ZNF415Q09FC8 603 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 LAMTOR4Q0VGL1 99 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ARHGAP19Q14CB8 494 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 SNRNP35Q16560 246 aaKnown RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 HADHQ16836 314 aaKnown RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 EXOC3L4Q17RC7 722 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 SYT14P1Q58G82 188 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 TEX30Q5JUR7 227 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ANKRD20A2Q5SQ80 823 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 SAPCD1Q5SSQ6 148 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 CCNYL2Q5T2Q4 361 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ANKRD20A1Q5TYW2 823 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ANKRD20A3Q5VUR7 823 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 PTRHD1Q6GMV3 140 aaKnown RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ARHGAP11AQ6P4F7 1023 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 RBMS3Q6XE24 437 aaKnown RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 CYP4V2Q6ZWL3 525 aaPredicted RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ZNF410Q86VK4 478 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ECHDC2Q86YB7 292 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 SLC22A9Q8IVM8 553 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ZBED8Q8IZ13 594 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 CDK20Q8IZL9 346 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 LINC00518Q8N0U6 118 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 GPD1LQ8N335 351 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 NPEPL1Q8NDH3 523 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ADAMTS16Q8TE57 1224 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 GRHL3Q8TE85 626 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 MYDGFQ969H8 173 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 CCDC127Q96BQ5 260 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 SLC25A36Q96CQ1 311 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 LRRC39Q96DD0 335 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 FAM111AQ96PZ2 611 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 CHP1Q99653 195 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 TXN2Q99757 166 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 BCL7BQ9BQE9 202 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 CCM2Q9BSQ5 444 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 NTMT1Q9BV86 223 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 ABCG8Q9H221 673 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 SYTL2Q9HCH5 934 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 INTS9Q9NV88 658 aaKnown RBP4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 DAPK2Q9UIK4 370 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 HEY1Q9Y5J3 304 aa4.46□□□□□ -1.7
CACNA1C-223ENST00000465278 SCN1AP35498 2009 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 A0A1B0GTQ1 180 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 A0A1W2PPQ1 181 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 RGSL1A5PLK6 1076 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 NEMP2A6NFY4 417 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 TMEM210A6NLX4 147 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 BTNL10A8MVZ5 291 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 SMIM1B2RUZ4 78 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 K7ERI5 159 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 SCO2O43819 266 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 SEC22BO75396 215 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 PIGNO95427 931 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 ACSL3O95573 720 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 LDOC1O95751 146 aaPredicted RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 HSPA4LO95757 839 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 NGFP01138 241 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 QDPRP09417 244 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 RAB40ALP0C0E4 278 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 PRPS2P11908 318 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 ERCC2P18074 760 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 TIMP3P35625 211 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 HTR2BP41595 481 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 HNMTP50135 292 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 VAMP7P51809 220 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 IST1P53990 364 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 PSMD4P55036 377 aaKnown RBP4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 B3GALT5-AS1P59052 145 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 SP4Q02446 784 aa4.45□□□□□ -1.7
CACNA1C-223ENST00000465278 GCNT1Q02742 428 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms