RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 SERPINA2P20848 420 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 TBXA2RP21731 343 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 CA8P35219 290 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 IFNAR2P48551 515 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 MRPS11P82912 194 aaKnown RBP3.05□□□□□ -1.92
CLK1-208ENST00000464454 OTUD4Q01804 1114 aaKnown RBP3.05□□□□□ -1.92
CLK1-208ENST00000464454 ST3GAL3Q11203 375 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 TPSAB1Q15661 275 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 PAGE2BQ5JRK9 111 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 OR5M10Q6IEU7 315 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 ACSM5Q6NUN0 579 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 FAHD2BQ6P2I3 314 aaPredicted RBP3.05□□□□□ -1.92
CLK1-208ENST00000464454 APOBEC3FQ8IUX4 373 aaKnown RBP3.05□□□□□ -1.92
CLK1-208ENST00000464454 ZNF525Q8N782 197 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 ZNF540Q8NDQ6 660 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 DENND6BQ8NEG7 585 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 FAHD2AQ96GK7 314 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 TTC25Q96NG3 672 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 SLC6A7Q99884 636 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 OMDQ99983 421 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 ERP44Q9BS26 406 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 DEFB126Q9BYW3 111 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 CRNKL1Q9BZJ0 848 aaKnown RBP3.05□□□□□ -1.92
CLK1-208ENST00000464454 IKZF5Q9H5V7 419 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 CAB39LQ9H9S4 337 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 MEAF6Q9HAF1 191 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 ZNF275Q9NSD4 429 aaPredicted RBP3.05□□□□□ -1.92
CLK1-208ENST00000464454 GNG12Q9UBI6 72 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 Q9UF83 564 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 MRPS7Q9Y2R9 242 aaKnown RBP3.05□□□□□ -1.92
CLK1-208ENST00000464454 PPIAL4AQ9Y536 164 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 MAD1L1Q9Y6D9 718 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 ADAMTS9Q9P2N4 1935 aa3.05□□□□□ -1.92
CLK1-208ENST00000464454 FRMPD4Q14CM0 1322 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 DHRS7CA6NNS2 312 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 B4DXG7 233 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 NPIPA7E9PJI5 369 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 MAGEB3O15480 346 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 PGK1P00558 417 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 F10P00742 488 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 KRTAP1-4P0C5Y4 121 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 NPIPA8P0DM63 369 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 CALRP27797 417 aaKnown RBP3.04□□□□□ -1.92
CLK1-208ENST00000464454 PRPHP41219 470 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 RPL29P47914 159 aaKnown RBP3.04□□□□□ -1.92
CLK1-208ENST00000464454 RGS4P49798 205 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 P2RY4P51582 365 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 EFNA3P52797 238 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 AP3M2P53677 418 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 EWSR1Q01844 656 aaKnown RBP eCLIP3.04□□□□□ -1.92
CLK1-208ENST00000464454 LAGE3Q14657 143 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 SYPL1Q16563 259 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 ANKDD1AQ495B1 522 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 ATAD3BQ5T9A4 648 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 C16orf62Q7Z3J2 963 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 KIAA1328Q86T90 577 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 ACOT1Q86TX2 421 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 GPR65Q8IYL9 337 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 LRRC43Q8N309 656 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 CLDN19Q8N6F1 224 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 OR13F1Q8NGS4 319 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 RLN3Q8WXF3 142 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 ARNTL2Q8WYA1 636 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 CTNNBL1Q8WYA6 563 aaPredicted RBP3.04□□□□□ -1.92
CLK1-208ENST00000464454 PSMG2Q969U7 264 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 FAF2Q96CS3 445 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 TRIM44Q96DX7 344 aaPredicted RBP3.04□□□□□ -1.92
CLK1-208ENST00000464454 VSIG2Q96IQ7 327 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 SENP8Q96LD8 212 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 KIR2DL4Q99706 377 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 CITED1Q99966 193 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 C19orf24Q9BVV8 132 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 ELOVL3Q9HB03 270 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 WRAP73Q9P2S5 460 aaPredicted RBP3.04□□□□□ -1.92
CLK1-208ENST00000464454 SPRR3Q9UBC9 169 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 APOBEC3BQ9UH17 382 aaKnown RBP3.04□□□□□ -1.92
CLK1-208ENST00000464454 NPIPA1Q9UND3 350 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 FLVCR1Q9Y5Y0 555 aa3.04□□□□□ -1.92
CLK1-208ENST00000464454 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.03□□□□□ -1.92
CLK1-208ENST00000464454 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.03□□□□□ -1.92
CLK1-208ENST00000464454 MBLAC1A4D2B0 266 aaPredicted RBP3.03□□□□□ -1.92
CLK1-208ENST00000464454 H0YCG3 227 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 H3BMQ9 156 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 K7ENP7 123 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 K7EQM0 130 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 FCN1O00602 326 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 OR7A17O14581 309 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 CDX4O14627 284 aaPredicted RBP3.03□□□□□ -1.92
CLK1-208ENST00000464454 MSH4O15457 936 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 GMFGO60234 142 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 TPST2O60704 377 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 GPX5O75715 221 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 UGT2B17O75795 530 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 RHOBTB1O94844 696 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 UGT2B4P06133 528 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 GIG44P09565 113 aaPredicted RBP3.03□□□□□ -1.92
CLK1-208ENST00000464454 H2BFMP0C1H6 154 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 PRG2P13727 222 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 CPN1P15169 458 aa3.03□□□□□ -1.92
CLK1-208ENST00000464454 GCFC2P16383 781 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms