RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 ACSS1Q9NUB1 689 aaPredicted RBP20.14■□□□□ 0.81
USP4-208ENST00000464168 SH3BP4Q9P0V3 963 aa20.14■□□□□ 0.81
USP4-208ENST00000464168 BAIAP2L1Q9UHR4 511 aa20.14■□□□□ 0.81
USP4-208ENST00000464168 RNF115Q9Y4L5 304 aa20.14■□□□□ 0.81
USP4-208ENST00000464168 A0A1W2PQD3 144 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 RNF223E7ERA6 249 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 SLC28A1O00337 649 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 SCDO00767 359 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 GLRA3O75311 464 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 SOD3P08294 240 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 ALOX5P09917 674 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 DANCRP0C864 163 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 PABPC4LP0CB38 370 aaKnown RBP20.13■□□□□ 0.81
USP4-208ENST00000464168 SFTPDP35247 375 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 EIF1P41567 113 aaKnown RBP20.13■□□□□ 0.81
USP4-208ENST00000464168 SERPINB4P48594 390 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 NCMAPQ5T1S8 102 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 ZCCHC12Q6PEW1 402 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 TFAP2EQ6VUC0 442 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 COX18Q8N8Q8 333 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 OR2T11Q8NH01 316 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 SRXN1Q9BYN0 137 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 TXLNGYQ9BZA5 131 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 OXSMQ9NWU1 459 aa20.13■□□□□ 0.81
USP4-208ENST00000464168 FREM1Q5H8C1 2179 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 RGS14O43566 566 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 PLIN3O60664 434 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 FAM153BP0C7A2 387 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 FOXF1Q12946 379 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 VEZF1Q14119 521 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 RNPS1Q15287 305 aaKnown RBP20.12■□□□□ 0.81
USP4-208ENST00000464168 TAB1Q15750 504 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 FAM153CQ494X1 144 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 RFTN2Q52LD8 501 aaPredicted RBP20.12■□□□□ 0.81
USP4-208ENST00000464168 SFRP5Q5T4F7 317 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 TUSC5Q8IXB3 177 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 CLHC1Q8NHS4 586 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 NEUROG1Q92886 237 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 BTBD2Q9BX70 525 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 C12orf65Q9H3J6 166 aaKnown RBP20.12■□□□□ 0.81
USP4-208ENST00000464168 TUBB1Q9H4B7 451 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 KLHL13Q9P2N7 655 aa20.12■□□□□ 0.81
USP4-208ENST00000464168 CLOCKO15516 846 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 OIP5O43482 229 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 CD3EP07766 207 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 CPA3P15088 417 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 EFNA1P20827 205 aaPredicted RBP20.11■□□□□ 0.81
USP4-208ENST00000464168 ELK4P28324 431 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 ZNF117Q03924 483 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 ETFDHQ16134 617 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 CCDC153Q494R4 210 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 TMEM201Q5SNT2 666 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 HEPHL1Q6MZM0 1159 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 ATG4DQ86TL0 474 aaPredicted RBP20.11■□□□□ 0.81
USP4-208ENST00000464168 CNPY4Q8N129 248 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 SMAP2Q8WU79 429 aaPredicted RBP20.11■□□□□ 0.81
USP4-208ENST00000464168 HSD17B8Q92506 261 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 FBXW5Q969U6 566 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 CPNE4Q96A23 557 aaPredicted RBP20.11■□□□□ 0.81
USP4-208ENST00000464168 FAM120BQ96EK7 910 aaKnown RBP20.11■□□□□ 0.81
USP4-208ENST00000464168 TRMT61AQ96FX7 289 aaKnown RBP20.11■□□□□ 0.81
USP4-208ENST00000464168 REXO5Q96IC2 774 aaKnown RBP20.11■□□□□ 0.81
USP4-208ENST00000464168 TIGARQ9NQ88 270 aa20.11■□□□□ 0.81
USP4-208ENST00000464168 ZNF195O14628 629 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 HSPA4LO95757 839 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 IL32P24001 234 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 ADH6P28332 368 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 POU6F2P78424 691 aaPredicted RBP20.1■□□□□ 0.81
USP4-208ENST00000464168 DMTNQ08495 405 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 CBLN3Q6UW01 205 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 SEZ6L2Q6UXD5 910 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 ZNF619Q8N2I2 560 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 FBXO27Q8NI29 283 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 PHOSPHO1Q8TCT1 267 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 JADE3Q92613 823 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 REG4Q9BYZ8 158 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 ESRP2Q9H6T0 727 aaKnown RBP20.1■□□□□ 0.81
USP4-208ENST00000464168 GP6Q9HCN6 339 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 DUSP22Q9NRW4 184 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 SIRT3Q9NTG7 399 aaPredicted RBP20.1■□□□□ 0.81
USP4-208ENST00000464168 SNX8Q9Y5X2 465 aa20.1■□□□□ 0.81
USP4-208ENST00000464168 CHD3Q12873 2000 aaKnown RBP20.09■□□□□ 0.81
USP4-208ENST00000464168 AZIN1O14977 448 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 PRKD3O94806 890 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 ADAP00813 363 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 HMGN2P05204 90 aaKnown RBP20.09■□□□□ 0.81
USP4-208ENST00000464168 YES1P07947 543 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 THBS1P07996 1170 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 LINC00032P0C843 101 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 CRHR1P34998 444 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 IDUAP35475 653 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 CDKN1AP38936 164 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 CCT5P48643 541 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 RPL38P63173 70 aaKnown RBP20.09■□□□□ 0.81
USP4-208ENST00000464168 TMEM176BQ3YBM2 270 aaPredicted RBP20.09■□□□□ 0.81
USP4-208ENST00000464168 ZNF672Q499Z4 452 aaPredicted RBP20.09■□□□□ 0.81
USP4-208ENST00000464168 KLHL26Q53HC5 615 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 LRIG3Q6UXM1 1119 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 RNF165Q6ZSG1 346 aa20.09■□□□□ 0.81
USP4-208ENST00000464168 FCRLAQ7L513 359 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms