RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TEKT3Q9BXF9 490 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 PANK2Q9BZ23 570 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 SDCBP2Q9H190 292 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 FAM124BQ9H5Z6 455 aaPredicted RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 MCCC2Q9HCC0 563 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 POLE4Q9NR33 117 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 UFSP2Q9NUQ7 469 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 MTCH1Q9NZJ7 389 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 STX18Q9P2W9 335 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 ERVK-18Q9QC07 812 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 CTSFQ9UBX1 484 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 MRTO4Q9UKD2 239 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 ZNF490Q9ULM2 529 aaPredicted RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 DIMT1Q9UNQ2 313 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 CA5BQ9Y2D0 317 aa3.3□□□□□ -1.88
ITGB1-208ENST00000464001 CSDC2Q9Y534 153 aaKnown RBP3.3□□□□□ -1.88
ITGB1-208ENST00000464001 SPATA31D1Q6ZQQ2 1576 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 FRMPD3Q5JV73 1810 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 YJEFN3A6XGL0 299 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 RSPH10B2B2RC85 870 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 ZNF732B4DXR9 585 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 H0YL77 283 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 BTN3A3O00478 584 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 CLDN5O00501 218 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 TFECO14948 347 aaPredicted RBP3.29□□□□□ -1.88
ITGB1-208ENST00000464001 ARPC2O15144 300 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 MLNRO43193 412 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 CBR3O75828 277 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 PGK1P00558 417 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 APOA1P02647 267 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 GLAP06280 429 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 RSPH10BP0C881 870 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 GSTT2P0CG29 244 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 GSTT2BP0CG30 244 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 CT45A8P0DMV1 189 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 CT45A9P0DMV2 189 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 PRKAR1AP10644 381 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 DARSP14868 501 aaKnown RBP3.29□□□□□ -1.88
ITGB1-208ENST00000464001 GSTM3P21266 225 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 PPP2R1BP30154 601 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 CASP14P31944 242 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 SFTPDP35247 375 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 CASP4P49662 377 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 SLC26A2P50443 739 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 NDST1P52848 882 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 DAOAP59103 153 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 YWHAEP62258 255 aaKnown RBP3.29□□□□□ -1.88
ITGB1-208ENST00000464001 RAB11AP62491 216 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 GPR176Q14439 515 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 MTF1Q14872 753 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 RAB11BQ15907 218 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 MICBQ29980 383 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 CT45A2Q5DJT8 189 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 PDZK1Q5T2W1 519 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 MLIPQ5VWP3 458 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 LYPLAL1Q5VWZ2 237 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 WSCD1Q658N2 575 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 SNRNP48Q6IEG0 339 aaKnown RBP3.29□□□□□ -1.88
ITGB1-208ENST00000464001 OR4F3Q6IEY1 312 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 CDC42EP5Q6NZY7 148 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 C17orf107Q6ZR85 190 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 DHDDSQ86SQ9 333 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 KIAA1328Q86T90 577 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 LINC00523Q86TU6 105 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 CATSPERDQ86XM0 798 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 NKAIN4Q8IVV8 208 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 SYT14Q8NB59 555 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 COLGALT1Q8NBJ5 622 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 RNF149Q8NC42 400 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 SDR9C7Q8NEX9 313 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 OR2L3Q8NG85 312 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 OR6M1Q8NGM8 313 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 NDNFQ8TB73 568 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 CD300LFQ8TDQ1 290 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 FAM3CQ92520 227 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 RAB1CQ92928 201 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 LHX4Q969G2 390 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 TOMM40LQ969M1 308 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 SLC25A36Q96CQ1 311 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 PELI1Q96FA3 418 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 AMDHD1Q96NU7 426 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 S1PR3Q99500 378 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 KCNS3Q9BQ31 491 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 PRRG3Q9BZD7 231 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 OR2AG1Q9H205 316 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 MTIF3Q9H2K0 278 aaKnown RBP3.29□□□□□ -1.88
ITGB1-208ENST00000464001 DPEP2Q9H4A9 486 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 ZNF665Q9H7R5 613 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 MTHFD2LQ9H903 347 aaPredicted RBP3.29□□□□□ -1.88
ITGB1-208ENST00000464001 RNF121Q9H920 327 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 GNB4Q9HAV0 340 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 RAVER2Q9HCJ3 691 aaKnown RBP3.29□□□□□ -1.88
ITGB1-208ENST00000464001 IL26Q9NPH9 171 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 PNO1Q9NRX1 252 aaKnown RBP3.29□□□□□ -1.88
ITGB1-208ENST00000464001 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.29□□□□□ -1.88
ITGB1-208ENST00000464001 NLGN3Q9NZ94 848 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 HACD3Q9P035 362 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 SLC7A8Q9UHI5 535 aa3.29□□□□□ -1.88
ITGB1-208ENST00000464001 SATB2Q9UPW6 733 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms