RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ARHGEF9O43307 516 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 CXCL13O43927 109 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 DIAPH2O60879 1101 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 BPGMP07738 259 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 PABPC4LP0CB38 370 aaKnown RBP12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 ATP6V1C1P21283 382 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 ELK4P28324 431 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 ADH6P28332 368 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 SUMO3P55854 103 aaPredicted RBP12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 C21orf58P58505 322 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 VSNL1P62760 191 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 NKX6-1P78426 367 aaPredicted RBP12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 CD226Q15762 336 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 ACKR1Q16570 336 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 SMU1Q2TAY7 513 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 KLHL26Q53HC5 615 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 IL23RQ5VWK5 629 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 HBMQ6B0K9 141 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 ZCCHC23Q6ZST2 131 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 BIVMQ86UB2 503 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 KRTAP1-3Q8IUG1 177 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 FNDC5Q8NAU1 212 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 POC1BQ8TC44 478 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 AGR3Q8TD06 166 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 ADAMTS15Q8TE58 950 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 AENQ8WTP8 325 aaKnown RBP12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 OSTF1Q92882 214 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 OTUB1Q96FW1 271 aaPredicted RBP12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 CHMP6Q96FZ7 201 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 SH3YL1Q96HL8 342 aaPredicted RBP12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 ZIM3Q96PE6 472 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 NPAS1Q99742 590 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 TMEM109Q9BVC6 243 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 BHLHE41Q9C0J9 482 aaPredicted RBP12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 OR10A4Q9H209 315 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 ZDHHC2Q9UIJ5 367 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 ABCA2Q9BZC7 2435 aa12.86□□□□□ -0.35
SNRNP40-203ENST00000463988 NPIPB9F8W1W9 429 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 TNFSF11O14788 317 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 TYROBPO43914 113 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 ETV4P43268 484 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 ATP12AP54707 1039 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 CARD18P57730 90 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 ZNF117Q03924 483 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 MAD2L1Q13257 205 aaPredicted RBP12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 TP53BP2Q13625 1128 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 SPDYE7PQ495Y7 208 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 DCST2Q5T1A1 773 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 PPP4R4Q6NUP7 873 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 BHLHB9Q6PI77 547 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 C20orf204Q6ZNR8 217 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 BEND4Q6ZU67 534 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 ZNF550Q7Z398 422 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 LILRA2Q8N149 483 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 PHOSPHO1Q8TCT1 267 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 C18orf12Q96KH6 178 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 KLHL15Q96M94 604 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 C1orf50Q9BV19 199 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 CXorf36Q9H7Y0 433 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 TIGARQ9NQ88 270 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 ASIC5Q9NY37 505 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 ICAM5Q9UMF0 924 aa12.85□□□□□ -0.35
SNRNP40-203ENST00000463988 UQCRHLA0A096LP55 91 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 GJE1A6NN92 205 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 SMPD2O60906 423 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 C6orf47O95873 294 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 OPN1LWP04000 364 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 NID1P14543 1247 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 HOXB4P17483 251 aaPredicted RBP12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 LOXP28300 417 aaPredicted RBP12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 P2RX1P51575 399 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 EMX2Q04743 252 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 EXOC3L2Q2M3D2 409 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 WDR93Q6P2C0 686 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 PRSS57Q6UWY2 283 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 STAC2Q6ZMT1 411 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 C22orf34Q6ZV56 151 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 STK32CQ86UX6 486 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 KRTCAP2Q8N6L1 136 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 CPNE4Q96A23 557 aaPredicted RBP12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 TUBGCP3Q96CW5 907 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 KLHDC3Q9BQ90 382 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 DUSP26Q9BV47 211 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 GSX1Q9H4S2 264 aaPredicted RBP12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 GP6Q9HCN6 339 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 CLEC4AQ9UMR7 237 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 GPR52Q9Y2T5 361 aa12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 GPC6Q9Y625 555 aaPredicted RBP12.84□□□□□ -0.35
SNRNP40-203ENST00000463988 TLN2Q9Y4G6 2542 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 DUXAA6NLW8 204 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF195O14628 629 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 KLF4O43474 513 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 EIF4E2O60573 245 aaKnown RBP12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 SKAP2O75563 359 aaPredicted RBP12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 THBDP07204 575 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 TUBBP07437 444 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 CREB1P16220 341 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms