RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SLC22A25Q6T423 547 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 TMEM108Q6UXF1 575 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 P2RY8Q86VZ1 359 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 MISPQ8IVT2 679 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 DEPDC4Q8N2C3 294 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 MUC15Q8N387 334 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 B4GALNT2Q8NHY0 566 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 POC1BQ8TC44 478 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 C10orf105Q8TEF2 133 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 HTRA1Q92743 480 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 AMDHD1Q96NU7 426 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 C1QTNF3Q9BXJ4 246 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 SRXN1Q9BYN0 137 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 MRPL46Q9H2W6 279 aaKnown RBP12.81□□□□□ -0.36
SMC1A-204ENST00000463684 CHODLQ9H9P2 273 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 EQTNQ9NQ60 294 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 TAS2R7Q9NYW3 318 aa12.81□□□□□ -0.36
SMC1A-204ENST00000463684 LOC100289279A0A1B0GTE1 492 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 CCDC151A5D8V7 595 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 A8MT66 165 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 E7EQL1 145 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 SUPT7LO94864 414 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 PRPS2P11908 318 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 GGT1P19440 569 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 IGFBP5P24593 272 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 ELK4P28324 431 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 PHBP35232 272 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 OR3A2P47893 321 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 FABP6P51161 128 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 GUCY2DQ02846 1103 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 ZNF763Q0D2J5 394 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 PRSS53Q2L4Q9 553 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 SPDYAQ5MJ70 313 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 TEX35Q5T0J7 233 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 UBQLN4Q9NRR5 601 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 KLHL9Q9P2J3 617 aa12.8□□□□□ -0.36
SMC1A-204ENST00000463684 H7C417 338 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 SCDO00767 359 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 ZNF195O14628 629 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 PGRP06401 933 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 LINGO3P0C6S8 592 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 SHC1P29353 583 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 TMEM176BQ3YBM2 270 aaPredicted RBP12.79□□□□□ -0.36
SMC1A-204ENST00000463684 KLHL17Q6TDP4 642 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 GPRIN3Q6ZVF9 776 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 OR6Y1Q8NGX8 325 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 CEP70Q8NHQ1 597 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 ZNF382Q96SR6 550 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 IQCGQ9H095 443 aaKnown RBP12.79□□□□□ -0.36
SMC1A-204ENST00000463684 RAB17Q9H0T7 212 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 SIRT5Q9NXA8 310 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 NPAP1Q9NZP6 1156 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 PRSS50Q9UI38 385 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 WBP11Q9Y2W2 641 aaKnown RBP12.79□□□□□ -0.36
SMC1A-204ENST00000463684 PMF1-BGLAPU3KQ54 211 aa12.79□□□□□ -0.36
SMC1A-204ENST00000463684 GOLGA8QA0A0J9YX86 632 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 GOLGA8OA6NCC3 632 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 GOLGA8NF8WBI6 632 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 GOLGA8RI6L899 631 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 WIPF1O43516 503 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 NKX2-2O95096 273 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 NUDT14O95848 222 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 INHBAP08476 426 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 IFI6P09912 130 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 DHRS4L1P0CG22 281 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 TAC1P20366 129 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 ENPP1P22413 925 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 PTAFRP25105 342 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 LCN1P31025 176 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 GPC1P35052 558 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 HTR6P50406 440 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 EFNA4P52798 201 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 PRKAG1P54619 331 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 CHRNB3Q05901 458 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 FOXF1Q12946 379 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 ARL13AQ5H913 290 aaPredicted RBP12.78□□□□□ -0.36
SMC1A-204ENST00000463684 FAM71E1Q6IPT2 247 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 ZNF100Q8IYN0 542 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 CDRT4Q8N9R6 151 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 ATP6V1C2Q8NEY4 427 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 FBXO27Q8NI29 283 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 FAM110BQ8TC76 370 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 BCO1Q9HAY6 547 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 STK38LQ9Y2H1 464 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 PRR14LQ5THK1 2151 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 PCNX3Q9H6A9 2034 aa12.78□□□□□ -0.36
SMC1A-204ENST00000463684 IGHV3-15A0A0B4J1V0 119 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 A0A1W2PQD3 144 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 SLC35F4A4IF30 521 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 OR5H1A6NKK0 313 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 C9JVG2 144 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 KIF2AO00139 706 aaPredicted RBP12.77□□□□□ -0.37
SMC1A-204ENST00000463684 RGS14O43566 566 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 KIAA0513O60268 411 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 KCNK2O95069 426 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 PGM3O95394 542 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 IGHV1-2P23083 117 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 SLC7A1P30825 629 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 MAGEA12P43365 314 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms