RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	BCAS1	O75363	584 aa	Predicted RBP	13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	UGT2B17	O75795	530 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	TOX	O94900	526 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	AGR2	O95994	175 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	SNRPB2	P08579	225 aa	Known RBP	13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	TROVE2	P10155	538 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	UBL4A	P11441	157 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	ZNF708	P17019	499 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	CHRNB4	P30926	498 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	PTGER4	P35408	488 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	CRAT	P43155	626 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	ATP4B	P51164	291 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	MVD	P53602	400 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	CHRNE	Q04844	493 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	ART3	Q13508	389 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	MAPK14	Q16539	360 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	PAGE3	Q5JUK9	113 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	BLOC1S3	Q6QNY0	202 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	MISP	Q8IVT2	679 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	ZNF619	Q8N2I2	560 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	RNF145	Q96MT1	663 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	NMUR2	Q9GZQ4	415 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	HOXD1	Q9GZZ0	328 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	RUBCNL	Q9H714	662 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	TPT1P8	Q9HAU6	139 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	SLAMF8	Q9P0V8	285 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	ZNF337	Q9Y3M9	751 aa		13.72	□□□□□ -0.21
SNU13-205	ENST00000463675	MAST4	O15021	2626 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	SERINC4	A6NH21	518 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	CLDN24	A6NM45	220 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	AHRR	A9YTQ3	701 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	SOX30	O94993	753 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	KRT75	O95678	551 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	OPN1LW	P04000	364 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	BCHE	P06276	602 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	UBTFL6	P0CB48	400 aa	Predicted RBP	13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	PEPD	P12955	493 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	HOXB9	P17482	250 aa	Predicted RBP	13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	AGA	P20933	346 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	CHM	P24386	653 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	ANXA11	P50995	505 aa	Known RBP	13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	CLDN20	P56880	219 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	TOMM34	Q15785	309 aa	Predicted RBP	13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	LACC1	Q8IV20	430 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	LIX1L	Q8IVB5	337 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	MSRB3	Q8IXL7	192 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	C9orf106	Q8NAJ2	232 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	STON2	Q8WXE9	905 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	PIGQ	Q9BRB3	760 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	SIKE1	Q9BRV8	207 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	SLC25A37	Q9NYZ2	338 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	TRIM33	Q9UPN9	1127 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	PCDHB14	Q9Y5E9	798 aa		13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.71	□□□□□ -0.21
SNU13-205	ENST00000463675	HCFC1	P51610	2035 aa		13.71	□□□□□ -0.22
SNU13-205	ENST00000463675		A0A096LPI6	279 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	CSTA	P01040	98 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	NUDT7	P0C024	238 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	ZCCHC18	P0CG32	403 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	NR2F1	P10589	423 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	CPN1	P15169	458 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	ZNF17	P17021	662 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	IL11	P20809	199 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	MSX1	P28360	303 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	MDH1	P40925	334 aa	Known RBP	13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	SUCLG1	P53597	346 aa	Known RBP	13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	DSTN	P60981	165 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	SKP2	Q13309	424 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	ZNF141	Q15928	474 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	TMEM44	Q2T9K0	475 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	RIPPLY2	Q5TAB7	128 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	NSUN5P2	Q63ZY6	315 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	PPP4R4	Q6NUP7	873 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	MTERF4	Q7Z6M4	381 aa	Known RBP	13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	GCNT2	Q8N0V5	402 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	POC1B	Q8TC44	478 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	ASB5	Q8WWX0	329 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	ZNF524	Q96C55	264 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	ZG16B	Q96DA0	208 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	TRIM8	Q9BZR9	551 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	SLC38A1	Q9H2H9	487 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	SLC52A3	Q9NQ40	469 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	CLCF1	Q9UBD9	225 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	P2RX2	Q9UBL9	471 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	ICAM5	Q9UMF0	924 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	NAV2	Q8IVL1	2488 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675	ABCA12	Q86UK0	2595 aa		13.7	□□□□□ -0.22
SNU13-205	ENST00000463675		A0A087WZY1	265 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	CD8B2	A6NJW9	211 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	ZNF264	O43296	627 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	ATP8B1	O43520	1251 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	EPPIN	O95925	133 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	HOXD4	P09016	255 aa	Predicted RBP	13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	LINGO3	P0C6S8	592 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	BMP5	P22003	454 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	P2RX1	P51575	399 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	AGFG1	P52594	562 aa	Known RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms