RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ARSGQ96EG1 525 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 ZNF300Q96RE9 604 aaPredicted RBP9.77□□□□□ -0.85
RTF1-202ENST00000462276 NODALQ96S42 347 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 ZNF559Q9BR84 538 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 BDH2Q9BUT1 245 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 OSBPL11Q9BXB4 747 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 RLIMQ9NVW2 624 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 DNAJB12Q9NXW2 375 aaKnown RBP9.77□□□□□ -0.85
RTF1-202ENST00000462276 NDUFAF4Q9P032 175 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 C6orf203Q9P0P8 240 aaPredicted RBP9.77□□□□□ -0.85
RTF1-202ENST00000462276 DNAJB9Q9UBS3 223 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 TESQ9UGI8 421 aaKnown RBP9.77□□□□□ -0.85
RTF1-202ENST00000462276 KLF13Q9Y2Y9 288 aaPredicted RBP9.77□□□□□ -0.85
RTF1-202ENST00000462276 CHST2Q9Y4C5 530 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 WIF1Q9Y5W5 379 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 IGF2RP11717 2491 aa9.77□□□□□ -0.85
RTF1-202ENST00000462276 ANKRD11Q6UB99 2663 aaPredicted RBP9.77□□□□□ -0.85
RTF1-202ENST00000462276 NPIPA5A0A0B4J1W7 369 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 TRAV17A0A0B4J275 112 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 NPIPA7E9PJI5 369 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 ADAMDEC1O15204 470 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 HCRTR2O43614 444 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 MAN1A2O60476 641 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 SLC25A12O75746 678 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 NEURL1O76050 574 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 LDLRP01130 860 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 LINGO3P0C6S8 592 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 UBTFL6P0CB48 400 aaPredicted RBP9.76□□□□□ -0.85
RTF1-202ENST00000462276 NPIPA8P0DM63 369 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 PGCP20142 388 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 P2RX1P51575 399 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 MAP2K6P52564 334 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 GAS1P54826 345 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 ARG2P78540 354 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 SKP2Q13309 424 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 OR1C1Q15619 314 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 ATP6AP1Q15904 470 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 SWT1Q5T5J6 900 aaKnown RBP9.76□□□□□ -0.85
RTF1-202ENST00000462276 ZNF468Q5VIY5 522 aaPredicted RBP9.76□□□□□ -0.85
RTF1-202ENST00000462276 SLC25A25Q6KCM7 469 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 ZNF613Q6PF04 617 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 LINC00696Q6ZRV3 163 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 MARCH3Q86UD3 253 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 ZADH2Q8N4Q0 377 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 AMER2Q8N7J2 671 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 FAM86B1Q8N7N1 296 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 TMEM178AQ8NBL3 297 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 PSD4Q8NDX1 1056 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 OR6T1Q8NGN1 323 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 B4GALNT2Q8NHY0 566 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 DUSP19Q8WTR2 217 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 DNAJA4Q8WW22 397 aaPredicted RBP9.76□□□□□ -0.85
RTF1-202ENST00000462276 PYDC1Q8WXC3 89 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 TMEM234Q8WY98 164 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 CNOT9Q92600 299 aaKnown RBP9.76□□□□□ -0.85
RTF1-202ENST00000462276 SLCO4A1Q96BD0 722 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 CENPNQ96H22 339 aaPredicted RBP9.76□□□□□ -0.85
RTF1-202ENST00000462276 TMEM41AQ96HV5 264 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 C5orf34Q96MH7 638 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 PIP5K1AQ99755 562 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 FAM173AQ9BQD7 235 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 OSBPL10Q9BXB5 764 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 ANKRD19PQ9H560 264 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 PTGES2Q9H7Z7 377 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 TMEM27Q9HBJ8 222 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 FLRT3Q9NZU0 649 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 STX18Q9P2W9 335 aaKnown RBP9.76□□□□□ -0.85
RTF1-202ENST00000462276 TUBD1Q9UJT1 453 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 ICAM5Q9UMF0 924 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 CNTRLQ7Z7A1 2325 aa9.76□□□□□ -0.85
RTF1-202ENST00000462276 CACNA1GO43497 2377 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 CCDC88CQ9P219 2028 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 A0A087WZY1 265 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 CENPVL1A0A0U1RR11 272 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 A0A1W2PRQ8 180 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 HTR3EA5X5Y0 456 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 CLDN24A6NM45 220 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 H3BNX3 289 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 KLRC4-KLRK1H3BQV0 150 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 TAF4O00268 1085 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 CLOCKO15516 846 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 SCO2O43819 266 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 CBR3O75828 277 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 OR5F1O95221 314 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 EPPINO95925 133 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 SP1P08047 785 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 FKBP2P26885 142 aaKnown RBP9.75□□□□□ -0.85
RTF1-202ENST00000462276 PTGDSP41222 190 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 ACAA2P42765 397 aaKnown RBP9.75□□□□□ -0.85
RTF1-202ENST00000462276 HTR3AP46098 478 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 ARHGDIAP52565 204 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 ZNF136P52737 540 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 HMGA2P52926 109 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 VLDLRP98155 873 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 ST3GAL3Q11203 375 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 EPS8Q12929 822 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 CBFBQ13951 182 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 DGCR6Q14129 220 aa9.75□□□□□ -0.85
RTF1-202ENST00000462276 GANABQ14697 944 aaKnown RBP9.75□□□□□ -0.85
RTF1-202ENST00000462276 CD226Q15762 336 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms