RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CDK10Q15131 360 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 OR1Q1Q15612 314 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 LTB4RQ15722 352 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 ISXQ2M1V0 245 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 TBRG1Q3YBR2 411 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 DEFB134Q4QY38 66 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 C2orf27AQ580R0 203 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 EOGTQ5NDL2 527 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 MRPL2Q5T653 305 aaKnown RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 FHL5Q5TD97 284 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 RTL4Q6ZR62 310 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 CPOQ8IVL8 374 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 NKAIN4Q8IVV8 208 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 SFTPA1Q8IWL2 248 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 SYS1Q8N2H4 156 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 SLC44A3Q8N4M1 653 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 ASCC1Q8N9N2 400 aaKnown RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 SYT14Q8NB59 555 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 KCT2Q8NC54 265 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 OR5M3Q8NGP4 307 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 TMEM255BQ8WV15 326 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 CAPSLQ8WWF8 208 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 UCN3Q969E3 161 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 COL26A1Q96A83 441 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 BPIFA2Q96DR5 249 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 SIPA1Q96FS4 1042 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 SAMD8Q96LT4 415 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 FCRL4Q96PJ5 515 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 TM9SF2Q99805 663 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 ATF6BQ99941 703 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 TMEM43Q9BTV4 400 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 G6PC3Q9BUM1 346 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 TMED9Q9BVK6 235 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 GON7Q9BXV9 100 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 QRSL1Q9H0R6 528 aaKnown RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 TBC1D17Q9HA65 648 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 HINT3Q9NQE9 182 aaKnown RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 DIABLOQ9NR28 239 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF275Q9NSD4 429 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 AKAP7Q9P0M2 348 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 PILRAQ9UKJ1 303 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 GPR55Q9Y2T6 319 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-202ENST00000459727 CHST2Q9Y4C5 530 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 HS3ST3A1Q9Y663 406 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 CKAP5Q14008 2032 aa8.22□□□□□ -1.09
HDAC3-202ENST00000459727 FAM240BA0A1B0GVZ2 78 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 K7EQS6 105 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 LYRM1O43325 122 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 FCMRO60667 390 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 GATBO75879 557 aaKnown RBP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 SNAPC5O75971 98 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 NKX2-2O95096 273 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 TNFP01375 233 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 SLC35E2P0CK97 266 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 SAGP10523 405 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 MAGP20916 626 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 DRD5P21918 477 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 RFX3P48380 749 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 CLDN20P56880 219 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 NRG3P56975 720 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 GPR68Q15743 365 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF750Q32MQ0 723 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 PRRT3Q5FWE3 981 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 SLC35D3Q5M8T2 416 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 PYHIN1Q6K0P9 492 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 ARMC6Q6NXE6 501 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 ANKRD54Q6NXT1 300 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 FBXO42Q6P3S6 717 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 PLBD1Q6P4A8 553 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 TRILQ7L0X0 811 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 WDR53Q7Z5U6 358 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 LHFPL3Q86UP9 236 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 NOXA1Q86UR1 476 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 CACUL1Q86Y37 369 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 PLCZ1Q86YW0 608 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 KLBQ86Z14 1044 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 GALNT12Q8IXK2 581 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 LSMEM1Q8N8F7 131 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 OR4F15Q8NGB8 312 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 OR51G2Q8NGK0 314 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 FLVCR1-AS1Q8TAF5 88 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 BAHD1Q8TBE0 780 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 C15orf40Q8WUR7 153 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 OR1E3Q8WZA6 343 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 THRSPQ92748 146 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 KLK6Q92876 244 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 MSANTD3Q96H12 275 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 ST6GAL2Q96JF0 529 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 KCNJ15Q99712 375 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 KXD1Q9BQD3 176 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 CCDC3Q9BQI4 270 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 PRSS27Q9BQR3 290 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 MARVELD1Q9BSK0 173 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 LMF2Q9BU23 707 aaKnown RBP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 IFT27Q9BW83 186 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 SLC19A3Q9BZV2 496 aa8.21□□□□□ -1.1
HDAC3-202ENST00000459727 MKRN2Q9H000 416 aaKnown RBP8.21□□□□□ -1.1
HDAC3-202ENST00000459727 C11orf54Q9H0W9 315 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms