RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ATP4BP51164 291 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 TXNL4AP83876 142 aaKnown RBP18.73■□□□□ 0.59
VARS-218ENST00000459667 HPCAP84074 193 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 SQLEQ14534 574 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 ZNF141Q15928 474 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 TMEM44Q2T9K0 475 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 PLPPR5Q32ZL2 321 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 SLC25A35Q3KQZ1 300 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 C6orf10Q5SRN2 563 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 CBLN3Q6UW01 205 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 RFWD2Q8NHY2 731 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 ZFP90Q8TF47 636 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 SMPDL3BQ92485 455 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 KLHDC3Q9BQ90 382 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 POLE3Q9NRF9 147 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 SLC6A13Q9NSD5 602 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 FGFR1OP2Q9NVK5 253 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 TMEM45AQ9NWC5 275 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 KCNE5Q9UJ90 142 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 CARD8Q9Y2G2 431 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 WDR45Q9Y484 360 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 CENPVL1A0A0U1RR11 272 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 SERINC4A6NH21 518 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 SEC14L5O43304 696 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 KIAA0513O60268 411 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 UGT2B17O75795 530 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 NUDT14O95848 222 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 GUSBP08236 651 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 ZCCHC18P0CG32 403 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 UBL4AP11441 157 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 NCF2P19878 526 aaPredicted RBP18.72■□□□□ 0.59
VARS-218ENST00000459667 P2RX1P51575 399 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 TFF3Q07654 80 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 NDUFAF6Q330K2 333 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 GPAT3Q53EU6 434 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 TYW3Q6IPR3 259 aaKnown RBP18.72■□□□□ 0.59
VARS-218ENST00000459667 PLXDC2Q6UX71 529 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 CHMP1BQ7LBR1 199 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 GTPBP8Q8N3Z3 284 aaPredicted RBP18.72■□□□□ 0.59
VARS-218ENST00000459667 C9orf106Q8NAJ2 232 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 DOCK7Q96N67 2140 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 UCN2Q96RP3 112 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 CCDC167Q9P0B6 97 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 CLCF1Q9UBD9 225 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 ICAM5Q9UMF0 924 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 AP4B1Q9Y6B7 739 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 HCFC1P51610 2035 aa18.72■□□□□ 0.59
VARS-218ENST00000459667 PRAMEF27A3QJZ7 478 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 C7orf72A4D263 438 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 NR5A2O00482 541 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 DVL2O14641 736 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 ZNF264O43296 627 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 BMP5P22003 454 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 ZNF136P52737 540 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 SUMO3P55854 103 aaPredicted RBP18.71■□□□□ 0.59
VARS-218ENST00000459667 EEFSECP57772 596 aaKnown RBP18.71■□□□□ 0.59
VARS-218ENST00000459667 GTDC1Q4AE62 458 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 COX20Q5RI15 118 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 SLC2A7Q6PXP3 512 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 FRRS1Q6ZNA5 592 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 GRAMD2AQ8IUY3 354 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 FUNDC1Q8IVP5 155 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 ZNF619Q8N2I2 560 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 TMCO5AQ8N6Q1 288 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 GTF2H4Q92759 462 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 WNT2BQ93097 391 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 NPAS1Q99742 590 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 TM9SF2Q99805 663 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 SAP130Q9H0E3 1048 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 RUBCNLQ9H714 662 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 NPDC1Q9NQX5 325 aaPredicted RBP18.71■□□□□ 0.59
VARS-218ENST00000459667 STOML1Q9UBI4 398 aa18.71■□□□□ 0.59
VARS-218ENST00000459667 H0YC42 278 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 EIF4E2O60573 245 aaKnown RBP18.7■□□□□ 0.58
VARS-218ENST00000459667 H6PDO95479 791 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 LINGO3P0C6S8 592 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 CCR4P51679 360 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 SUCLG1P53597 346 aaKnown RBP18.7■□□□□ 0.58
VARS-218ENST00000459667 TPD52P55327 224 aaPredicted RBP18.7■□□□□ 0.58
VARS-218ENST00000459667 CLDN15P56746 228 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 CLDN20P56880 219 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 SYPL1Q16563 259 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 METTL21CQ5VZV1 264 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 BLOC1S3Q6QNY0 202 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 ANKFN1Q8N957 763 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 RELL2Q8NC24 303 aaPredicted RBP18.7■□□□□ 0.58
VARS-218ENST00000459667 POC1BQ8TC44 478 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 OIT3Q8WWZ8 545 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 SPDL1Q96EA4 605 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 AURKBQ96GD4 344 aaPredicted RBP18.7■□□□□ 0.58
VARS-218ENST00000459667 RNF145Q96MT1 663 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 TRNT1Q96Q11 434 aaKnown RBP18.7■□□□□ 0.58
VARS-218ENST00000459667 TPT1P8Q9HAU6 139 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 MRGBPQ9NV56 204 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 ZNF629Q9UEG4 869 aaPredicted RBP18.7■□□□□ 0.58
VARS-218ENST00000459667 LIPT1Q9Y234 373 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 L3MBTL1Q9Y468 752 aa18.7■□□□□ 0.58
VARS-218ENST00000459667 CYP7B1O75881 506 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 CSTAP01040 98 aa18.69■□□□□ 0.58
VARS-218ENST00000459667 TMIGD3P0DMS9 266 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms