RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 TIGARQ9NQ88 270 aa12.75□□□□□ -0.37
UPF3AP2-201ENST00000457924 MED17Q9NVC6 651 aa12.75□□□□□ -0.37
UPF3AP2-201ENST00000457924 SIRT5Q9NXA8 310 aa12.75□□□□□ -0.37
UPF3AP2-201ENST00000457924 TAS2R7Q9NYW3 318 aa12.75□□□□□ -0.37
UPF3AP2-201ENST00000457924 CISD1Q9NZ45 108 aaKnown RBP12.75□□□□□ -0.37
UPF3AP2-201ENST00000457924 KLHL13Q9P2N7 655 aa12.75□□□□□ -0.37
UPF3AP2-201ENST00000457924 STK38LQ9Y2H1 464 aa12.75□□□□□ -0.37
UPF3AP2-201ENST00000457924 FREM1Q5H8C1 2179 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 DPRXA6NFQ7 191 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 NTN1O95631 604 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 SLC18A2Q05940 514 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 ITGADQ13349 1161 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 P2RY6Q15077 328 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 ZNF239Q16600 458 aaKnown RBP12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 PLPPR5Q32ZL2 321 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 VPS26BQ4G0F5 336 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 ZNF678Q5SXM1 525 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 NUFIP2Q7Z417 695 aaKnown RBP12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 ATG4DQ86TL0 474 aaPredicted RBP12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 TRABD2AQ86V40 505 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 TUSC5Q8IXB3 177 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 TMEM151AQ8N4L1 468 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 GATSQ8NAP1 163 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 CPNE4Q96A23 557 aaPredicted RBP12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 AMDHD1Q96NU7 426 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 BEX2Q9BXY8 128 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 AMBRA1Q9C0C7 1298 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 EQTNQ9NQ60 294 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 NINJ2Q9NZG7 142 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 CADP27708 2225 aa12.74□□□□□ -0.37
UPF3AP2-201ENST00000457924 IGHV4-30-2A0A087WSY4 118 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 PRKD3O94806 890 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 OXSR1O95747 527 aaPredicted RBP12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 CD8AP01732 235 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 ENO1P06733 434 aaKnown RBP12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 NGFRP08138 427 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 IFI6P09912 130 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 PRPS2P11908 318 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 HPGDP15428 266 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 SFTPDP35247 375 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 EIF1P41567 113 aaKnown RBP12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 NUDT6P53370 316 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 DSCR9P59020 149 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 TMEM249Q2WGJ8 235 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 GLE1Q53GS7 698 aaKnown RBP12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 COX20Q5RI15 118 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 AGAP6Q5VW22 663 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 FAM71E1Q6IPT2 247 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 BHLHA15Q7RTS1 189 aaPredicted RBP12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 DTX2Q86UW9 622 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 TDRPQ86YL5 185 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 MISPQ8IVT2 679 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 OR4C3Q8NH37 302 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 SH3YL1Q96HL8 342 aaPredicted RBP12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 ADAD1Q96M93 576 aaKnown RBP12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 TMEM237Q96Q45 408 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 TNFRSF13CQ96RJ3 184 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 PAFAH2Q99487 392 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 SAP130Q9H0E3 1048 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 GP6Q9HCN6 339 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 MYNNQ9NPC7 610 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 TMEM160Q9NX00 188 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 LPAR3Q9UBY5 353 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 B3GALT5Q9Y2C3 310 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 WBP11Q9Y2W2 641 aaKnown RBP12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 TIMM22Q9Y584 194 aa12.73□□□□□ -0.37
UPF3AP2-201ENST00000457924 YLPM1P49750 1951 aaKnown RBP12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 ESYT3A0FGR9 886 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 FAM234BA2RU67 622 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 GJE1A6NN92 205 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 TRIM49D1C9J1S8 452 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 RAMP1O60894 148 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 NKX2-2O95096 273 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 YES1P07947 543 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 IMPDH1P20839 514 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 CDH11P55287 796 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 PKNOX1P55347 436 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 C21orf58P58505 322 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 HSPB3Q12988 150 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 STK11Q15831 433 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 UBAP2Q5T6F2 1119 aaKnown RBP12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 CLEC2AQ6UVW9 174 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 FCRLAQ7L513 359 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 B4GALNT2Q8NHY0 566 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 POC1BQ8TC44 478 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 MUCL1Q96DR8 90 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 FUT8Q9BYC5 575 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 SRXN1Q9BYN0 137 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 L2HGDHQ9H9P8 463 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 ZDHHC18Q9NUE0 388 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 POLR3HQ9Y535 204 aaPredicted RBP12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 NBEAL1Q6ZS30 2694 aa12.72□□□□□ -0.37
UPF3AP2-201ENST00000457924 ALPK2Q86TB3 2170 aa12.71□□□□□ -0.37
UPF3AP2-201ENST00000457924 SHISA9B4DS77 424 aa12.71□□□□□ -0.37
UPF3AP2-201ENST00000457924 POC1B-GALNT4F8VUJ3 575 aa12.71□□□□□ -0.37
UPF3AP2-201ENST00000457924 SCDO00767 359 aa12.71□□□□□ -0.37
UPF3AP2-201ENST00000457924 ELK4P28324 431 aa12.71□□□□□ -0.37
UPF3AP2-201ENST00000457924 PRKAG1P54619 331 aa12.71□□□□□ -0.37
UPF3AP2-201ENST00000457924 MANFP55145 182 aaKnown RBP12.71□□□□□ -0.37
UPF3AP2-201ENST00000457924 CASP9P55211 416 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms