RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 GTF2E2P29084 291 aaKnown RBP15.44■□□□□ 0.06
CCDC43-202ENST00000457422 FGF9P31371 208 aaPredicted RBP15.44■□□□□ 0.06
CCDC43-202ENST00000457422 CAPZBP47756 277 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 EMDP50402 254 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 RPS25P62851 125 aaKnown RBP15.44■□□□□ 0.06
CCDC43-202ENST00000457422 RUNX1T1Q06455 604 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 SLC13A2Q13183 592 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 ZNHIT3Q15649 155 aaPredicted RBP15.44■□□□□ 0.06
CCDC43-202ENST00000457422 COL13A1Q5TAT6 717 aaPredicted RBP15.44■□□□□ 0.06
CCDC43-202ENST00000457422 CXXC5Q7LFL8 322 aaKnown RBP15.44■□□□□ 0.06
CCDC43-202ENST00000457422 ZNF595Q8IYB9 648 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 LNX2Q8N448 690 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 DEFB119Q8N690 84 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 POC5Q8NA72 575 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 OR52N1Q8NH53 320 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 TCTN2Q96GX1 697 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 KCTD7Q96MP8 289 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 SDHCQ99643 169 aaPredicted RBP15.44■□□□□ 0.06
CCDC43-202ENST00000457422 TMEM27Q9HBJ8 222 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 ATP13A2Q9NQ11 1180 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 H2AFY2Q9P0M6 372 aaPredicted RBP15.44■□□□□ 0.06
CCDC43-202ENST00000457422 ZNF229Q9UJW7 825 aa15.44■□□□□ 0.06
CCDC43-202ENST00000457422 MRPS33Q9Y291 106 aaKnown RBP15.44■□□□□ 0.06
CCDC43-202ENST00000457422 A0A0B4J2E0 115 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 A0A1B0GX12 115 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 LILRA5A6NI73 299 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 J3QRE1 110 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 CHP2O43745 196 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 CTNSO60931 367 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 CDRT1O95170 752 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 RCBTB2O95199 551 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 WNT1P04628 370 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 MSL3P1P0C860 447 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 GAAP10253 952 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 BMP7P18075 431 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 KRR1Q13601 381 aaKnown RBP15.43■□□□□ 0.06
CCDC43-202ENST00000457422 FAM53BQ14153 422 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 C22orf42Q6IC83 251 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 CPOQ8IVL8 374 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 ZNF687Q8N1G0 1237 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 ARL14Q8N4G2 192 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 KLHL36Q8N4N3 616 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 SLC35B4Q969S0 331 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 TMEM203Q969S6 136 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 VSTM2LQ96N03 204 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 ZNF285Q96NJ3 590 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 ERVK13-1Q9NX77 482 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 YARS2Q9Y2Z4 477 aaKnown RBP15.43■□□□□ 0.06
CCDC43-202ENST00000457422 MED31Q9Y3C7 131 aa15.43■□□□□ 0.06
CCDC43-202ENST00000457422 MBTPS2O43462 519 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 HRO43593 1189 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 NSA2O95478 260 aaKnown RBP15.42■□□□□ 0.06
CCDC43-202ENST00000457422 NME1P15531 152 aaKnown RBP15.42■□□□□ 0.06
CCDC43-202ENST00000457422 POU3F3P20264 500 aaPredicted RBP15.42■□□□□ 0.06
CCDC43-202ENST00000457422 SEPHS1P49903 392 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 PSPHP78330 225 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 ELOCQ15369 112 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 ZSWIM7Q19AV6 140 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 LRIT3Q3SXY7 679 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 PDZK1Q5T2W1 519 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 LHFPL3Q86UP9 236 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 CDK20Q8IZL9 346 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 ASB15Q8WXK1 588 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 CNOT9Q92600 299 aaKnown RBP15.42■□□□□ 0.06
CCDC43-202ENST00000457422 RIT1Q92963 219 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 BPIFA2Q96DR5 249 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 PEX11GQ96HA9 241 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 ABHD8Q96I13 439 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 MAP3K3Q99759 626 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 COQ7Q99807 217 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 ZNF426Q9BUY5 554 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 SIGLEC7Q9Y286 467 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 TRDV1A0A1B0GX56 115 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 HRKO00198 91 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 SOCS6O14544 535 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 LRRTM2O43300 516 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 AKAP8O43823 692 aaKnown RBP15.42■□□□□ 0.06
CCDC43-202ENST00000457422 CDC123O75794 336 aaPredicted RBP15.42■□□□□ 0.06
CCDC43-202ENST00000457422 BMP8BP34820 402 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 SLC9A3P48764 834 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 MAT1AQ00266 395 aaKnown RBP15.42■□□□□ 0.06
CCDC43-202ENST00000457422 STX4Q12846 297 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 GAS6Q14393 721 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 ARMC4Q5T2S8 1044 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 NIPAL3Q6P499 406 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 BMP8AQ7Z5Y6 402 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 ZNF614Q8N883 585 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 LMAN1LQ9HAT1 526 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 MEPEQ9NQ76 525 aaPredicted RBP15.42■□□□□ 0.06
CCDC43-202ENST00000457422 TOR4AQ9NXH8 423 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 DNAJB12Q9NXW2 375 aaKnown RBP15.42■□□□□ 0.06
CCDC43-202ENST00000457422 TNFRSF10DQ9UBN6 386 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 CAB39Q9Y376 341 aaPredicted RBP15.42■□□□□ 0.06
CCDC43-202ENST00000457422 CLDN16Q9Y5I7 305 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 V9GYH0 126 aa15.42■□□□□ 0.06
CCDC43-202ENST00000457422 TRIOO75962 3097 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 THADAQ6YHU6 1953 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 LALBAP00709 142 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 IGKV1D-16P01601 117 aa15.41■□□□□ 0.06
CCDC43-202ENST00000457422 PROS1P07225 676 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms