RNA–Protein interactions for RNA: ENST00000456986.5

NEDD4L-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 8,436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-209ENST00000456986 USP3Q9Y6I4 520 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 GPRIN2O60269 458 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 BEST1O76090 585 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 UBBP0CG47 229 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 UBCP0CG48 685 aaKnown RBP8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 TRAPPC2P0DI81 140 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 TRAPPC2BP0DI82 140 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 HLA-EP13747 358 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 AMY2BP19961 511 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 GABRA3P34903 492 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 PPP2CBP62714 309 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 RPS27AP62979 156 aaKnown RBP8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 UBA52P62987 128 aaKnown RBP8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 HTRA4P83105 476 aaPredicted RBP8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 CD163Q86VB7 1156 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 TMPRSS12Q86WS5 348 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 SUMF1Q8NBK3 374 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 RNF128Q8TEB7 428 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 SMPDL3BQ92485 455 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 KCTD3Q9Y597 815 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 H7BY64 318 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 H7C1Q1 480 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 NDUFB2O95178 105 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 RPL17P18621 184 aaKnown RBP8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 MAKP20794 623 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 CNR2P34972 360 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 TMPPEQ6ZT21 453 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 CCDC116Q8IYX3 515 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 OR13C9Q8NGT0 318 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 OR5W2Q8NH69 310 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 DEDD2Q8WXF8 326 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 PRAP1Q96NZ9 151 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 P2RY13Q9BPV8 354 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 ERVK13-1Q9NX77 482 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 VNN3Q9NY84 501 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 GPR83Q9NYM4 423 aa8.04□□□□□ -1.12
NEDD4L-209ENST00000456986 MZT1Q08AG7 82 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 NDUFAF5Q5TEU4 345 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 OTOP2Q7RTS6 562 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 OR7G3Q8NG95 312 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 TRMT10AQ8TBZ6 339 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 TXNDC15Q96J42 360 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 CDCA3Q99618 268 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 GKN1Q9NS71 199 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 CENPMQ9NSP4 180 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 MARCH4Q9P2E8 410 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 MDC1Q14676 2089 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 ARHGEF17Q96PE2 2063 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 GREB1LQ9C091 1923 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 LRP5LA4QPB2 252 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 FAM221BA6H8Z2 402 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 SYPP08247 313 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 SYN1P17600 705 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 APOFQ13790 326 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 RAB33AQ14088 237 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 LRIT3Q3SXY7 679 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 WDR45BQ5MNZ6 344 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 FAM182AQ5T1J6 154 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 CNIH2Q6PI25 160 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 RNF111Q6ZNA4 994 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 SPRED1Q7Z699 444 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 OR4E2Q8NGC2 313 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 OR5AK2Q8NH90 309 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 IGSF8Q969P0 613 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 SPTSSAQ969W0 71 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 TMEM19Q96HH6 336 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 ARL6Q9H0F7 186 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 EMCNQ9ULC0 261 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 KRBOX1C9JBD0 128 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 ACP2P11117 423 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 TPT1P13693 172 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 PRSS3P35030 304 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 VSX2P58304 361 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 GLO1Q04760 184 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 ZNF705AQ6ZN79 300 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 B3GNT7Q8NFL0 401 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 BEST4Q8NFU0 473 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 CASTOR1Q8WTX7 329 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 FAM46AQ96IP4 442 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 CNTNAP3BQ96NU0 1288 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 TXNRD2Q9NNW7 524 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 TESQ9UGI8 421 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 POMT1Q9Y6A1 747 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 RDH16O75452 317 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 NSA2O95478 260 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 AK4P27144 223 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 GCAP28676 217 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 PREPP48147 710 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 RPL23AP62750 156 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 MS4A2Q01362 244 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 CLVS2Q5SYC1 327 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 KCTD11Q693B1 232 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 ZNF765Q7L2R6 523 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 IGFN1Q86VF2 1251 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 KLBQ86Z14 1044 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 SMAP2Q8WU79 429 aaPredicted RBP8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 NECTIN4Q96NY8 510 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 EPHX3Q9H6B9 360 aa8.03□□□□□ -1.12
NEDD4L-209ENST00000456986 THSD1Q9NS62 852 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms