RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 J3KTA2 159 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 RGS10O43665 173 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SEMA7AO75326 666 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ZFAND5O76080 213 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 HPGDP15428 266 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 TNFRSF1BP20333 461 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 CD82P27701 267 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ACAA2P42765 397 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 GIPRP48546 466 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SNTA1Q13424 505 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 GANABQ14697 944 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 TBCEQ15813 527 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 CSRP2Q16527 193 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SYT16Q17RD7 645 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 KLHL22Q53GT1 634 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 HSDL2Q6YN16 418 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 DGAT2L6Q6ZPD8 337 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 LACC1Q8IV20 430 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 NAXDQ8IW45 347 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ZSCAN1Q8NBB4 408 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 NFAM1Q8NET5 270 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 OR52J3Q8NH60 311 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 TMEM239Q8WW34 195 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 PIK3R3Q92569 461 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 NECAB3Q96P71 396 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 IP6K3Q96PC2 410 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 DEPDC7Q96QD5 511 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 DOK1Q99704 481 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 BARD1Q99728 777 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 NIPSNAP1Q9BPW8 284 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ITPAQ9BY32 194 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF700Q9H0M5 742 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC22A11Q9NSA0 550 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 RPS6KB2Q9UBS0 482 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF223Q9UK11 482 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ATXN7L1Q9ULK2 861 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 PCDHGB5Q9Y5G0 923 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 MAU2Q9Y6X3 613 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SEC16AO15027 2179 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 IGLV3-32A0A0A0MS00 114 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 LNP1A1A4G5 178 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF264O43296 627 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 HYAL3O43820 417 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 CDC40O60508 579 aaKnown RBP eCLIP6.3□□□□□ -1.41e-6■□□□□ 9.9
ECHDC1-210ENST00000454859 HCN1O60741 890 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 MITFO75030 526 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 CBFA2T3O75081 653 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 RFPL3O75679 317 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SEC14L2O76054 403 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 LYPD3O95274 346 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 CSTAP01040 98 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 APEHP13798 732 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 CD59P13987 128 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 MMP11P24347 488 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 IL12BP29460 328 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC5A2P31639 672 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 PGDP52209 483 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 EFNB1P98172 346 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 NCF4Q15080 339 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 MAPK14Q16539 360 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 TMPRSS9Q7Z410 1059 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ZER1Q7Z7L7 766 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 GALNT5Q7Z7M9 940 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 GPALPP1Q8IXQ4 340 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ENTHD1Q8IYW4 607 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 OR52L1Q8NGH7 329 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC22A8Q8TCC7 542 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 TMCO6Q96DC7 493 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 NUDT9Q9BW91 350 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 JAM3Q9BX67 310 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 CDCA4Q9BXL8 241 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 RSPO3Q9BXY4 272 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 RBM38Q9H0Z9 239 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 ADNPQ9H2P0 1102 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SEMA4GQ9NTN9 838 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC39A1Q9NY26 324 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 PTTG2Q9NZH5 202 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 RNF6Q9Y252 685 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC6A5Q9Y345 797 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 AK5Q9Y6K8 562 aa6.3□□□□□ -1.4
ECHDC1-210ENST00000454859 SPTBP11277 2137 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 A0A087WUJ7 227 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 CCDC187A0A096LP49 1063 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 TRIM64BA6NI03 449 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 PATE3B3GLJ2 98 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 C21orf140B9A014 251 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 IMPA2O14732 288 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 TPST2O60704 377 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 NOL3O60936 208 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 WBP4O75554 376 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 UTS2O95399 124 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 PGCP20142 388 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 EEF1B2P24534 225 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 DCKP27707 260 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC15A1P46059 708 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 PCYT1AP49585 367 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 LIMK1P53667 647 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 RNF4P78317 190 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 MEP1AQ16819 746 aa6.29□□□□□ -1.4
ECHDC1-210ENST00000454859 CTU2Q2VPK5 515 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms