RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TNFAIP8L2Q6P589 184 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 PGM2L1Q6PCE3 622 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 MEX3BQ6ZN04 569 aaKnown RBP15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 GDF7Q7Z4P5 450 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 SERPINA11Q86U17 422 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 TNIP2Q8NFZ5 429 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 OR10A6Q8NH74 314 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 GPR151Q8TDV0 419 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 WDR60Q8WVS4 1066 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 XAGE5Q8WWM1 108 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 TMBIM1Q969X1 311 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 C16orf58Q96GQ5 468 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 VSTM2LQ96N03 204 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 VCX3BQ9H321 246 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 KAT8Q9H7Z6 458 aaKnown RBP15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 GALNT9Q9HCQ5 603 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 DUSP22Q9NRW4 184 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 TMEM181Q9P2C4 612 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 ABCD2Q9UBJ2 740 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 NKX1-2Q9UD57 310 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 GPR55Q9Y2T6 319 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC6A5Q9Y345 797 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 OR10H1Q9Y4A9 318 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 APCP25054 2843 aa15.52■□□□□ 0.07
PRPF40A-204ENST00000450303 INTS1Q8N201 2190 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 A0A0G2JNJ9 132 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 ACOX3O15254 700 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 WDR1O75083 606 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 ICOSLGO75144 302 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 NKX2-2O95096 273 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 OR12D1P0DN82 309 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 ACP2P11117 423 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 ETFAP13804 333 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 GABRA3P34903 492 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 ADH7P40394 386 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 PTGDSP41222 190 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 CASP9P55211 416 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 RPS26P62854 115 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 RBBP4Q09028 425 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 TAF11Q15544 211 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 EIPR1Q53HC9 387 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 WIPI1Q5MNZ9 446 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 GCNT6Q5T4J0 391 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 ERICH5Q6P6B1 374 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 SLC44A2Q8IWA5 706 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 METTL25Q8N6Q8 603 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 COX18Q8N8Q8 333 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 SLC16A11Q8NCK7 471 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 OR1J4Q8NGS1 313 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 HOXB13Q92826 284 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 TMEM41AQ96HV5 264 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 CLPTM1LQ96KA5 538 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 BTBD9Q96Q07 612 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 UBQLN3Q9H347 655 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 KCNJ16Q9NPI9 418 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 CMTM6Q9NX76 183 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 KLRF1Q9NZS2 232 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 P2RX2Q9UBL9 471 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 Q9UFV3 132 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 LIPT1Q9Y234 373 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 MED12Q93074 2177 aa15.51■□□□□ 0.07
PRPF40A-204ENST00000450303 FRG2CA6NGY1 282 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 KDM4EB2RXH2 506 aaPredicted RBP15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 TO15178 435 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 TOXO94900 526 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 STAMBPO95630 424 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 CT45A8P0DMV1 189 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 CT45A9P0DMV2 189 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 BMP2P12643 396 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 KRT20P35900 424 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 MVDP53602 400 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 PSMD4P55036 377 aaKnown RBP15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 POU6F2P78424 691 aaPredicted RBP15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 LIPEQ05469 1076 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 SELPLGQ14242 412 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 CYP27C1Q4G0S4 372 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 CT45A2Q5DJT8 189 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 COX20Q5RI15 118 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 TIGD3Q6B0B8 471 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 NPSR1Q6W5P4 371 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 C16orf62Q7Z3J2 963 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 YRDCQ86U90 279 aaKnown RBP15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 LIX1LQ8IVB5 337 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 SLC30A8Q8IWU4 369 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 OR4N2Q8NGD1 307 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 OR5D16Q8NGK9 328 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 FBXO30Q8TB52 745 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 NTNG2Q96CW9 530 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 SLC35A4Q96G79 324 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 COL21A1Q96P44 957 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 ADOQ96SZ5 270 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 BTBD2Q9BX70 525 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 OSBPL11Q9BXB4 747 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 ENKD1Q9H0I2 346 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 ALG2Q9H553 416 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 IKZF5Q9H5V7 419 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 NPDC1Q9NQX5 325 aaPredicted RBP15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 CALML5Q9NZT1 146 aa15.5■□□□□ 0.07
PRPF40A-204ENST00000450303 PRAMEF25A6NGN4 478 aa15.49■□□□□ 0.07
PRPF40A-204ENST00000450303 FAM220BPB1ANY3 271 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms