RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RIIAD1A6NNX1 92 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 I6L893 689 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 TGFAP01135 160 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 NDUFB7P17568 137 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 MAOAP21397 527 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 TBXA2RP21731 343 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 PGM1P36871 562 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 BST1Q10588 318 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 AGERQ15109 404 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 TMEM176BQ3YBM2 270 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 CCDC71Q8IV32 467 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 UEVLDQ8IX04 471 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 PAPD5Q8NDF8 572 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR7G1Q8NGA0 311 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR4K1Q8NGD4 311 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF583Q96ND8 569 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 SEPHS2Q99611 448 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 UBQLN4Q9NRR5 601 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 WASF3Q9UPY6 502 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 DOCK10Q96BY6 2186 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF236Q9UL36 1845 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 C16orf97H3BN30 126 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 HCRTR1O43613 425 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 CHRM4P08173 479 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 SBK2P0C263 348 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC35E2BP0CK96 405 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC35E2P0CK97 266 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 CD1DP15813 335 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 IMPA1P29218 277 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 PTGER4P35408 488 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 SOX6P35712 828 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 RNF144AP50876 292 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 CSNK2BP67870 215 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 CSNK1G2P78368 415 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 CBFBQ13951 182 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 ALKBH6Q3KRA9 238 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 METTL2BQ6P1Q9 378 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 FAM83HQ6ZRV2 1179 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 P2RY8Q86VZ1 359 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR52R1Q8NGF1 315 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 AKR1E2Q96JD6 320 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 MS4A4EQ96PG1 132 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR52A5Q9H2C5 316 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 DENND2DQ9H6A0 471 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 TMEM45AQ9NWC5 275 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 CBLCQ9ULV8 474 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 NPFFR2Q9Y5X5 522 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 FASNP49327 2511 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 A0A1B0GTH9 108 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 RGS10O43665 173 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 PLOD3O60568 738 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 DHRS4L1P0CG22 281 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 ADORA3P0DMS8 318 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 GSTT1P30711 240 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 DCTP40126 519 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 MTNR1AP48039 350 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 PCBP3P57721 371 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 CDKL1Q00532 357 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 TBC1D28Q2M2D7 210 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 TMEM65Q6PI78 240 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 OGFOD3Q6PK18 319 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 AAED1Q7RTV5 226 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 GALNT11Q8NCW6 608 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 RASSF1Q9NS23 344 aa5.23□□□□□ -1.57
CDC42BPA-209ENST00000448940 HOXD4P09016 255 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF23P17027 643 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 HOXB9P17482 250 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 C1orf185Q5T7R7 199 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 STEAP3Q658P3 488 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 TCTN3Q6NUS6 607 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR2T12Q8NG77 320 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR10A5Q9H207 317 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 DSN1Q9H410 356 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 HEY2Q9UBP5 337 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 PDCD11Q14690 1871 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 MYO5AQ9Y4I1 1855 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ANTXRLA6NF34 631 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 DBIP07108 87 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ARL3P36405 182 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 TSFMP43897 325 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 RAB7AP51149 207 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 GPR143P51810 404 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 PRPS1P60891 318 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 NKX6-1P78426 367 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 NPTX1Q15818 432 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 SNCBQ16143 134 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 PRAMEF17Q5VTA0 474 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 GALNT10Q86SR1 603 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 SNRNP27Q8WVK2 155 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 PPM1MQ96MI6 270 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 PITX2Q99697 317 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 GPATCH1Q9BRR8 931 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 SARGQ9BW04 601 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 ENY2Q9NPA8 101 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 FAM159BA6NKW6 160 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 SASH3O75995 380 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 C6orf47O95873 294 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 BPGMP07738 259 aa5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 FGF3P11487 239 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-209ENST00000448940 MECP2P51608 486 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms