RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 PCNPQ8WW12 178 aaKnown RBP12.69□□□□□ -0.38
POLR1B-209ENST00000448770 PHF21AQ96BD5 680 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 MAP6Q96JE9 813 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 PGLYRP3Q96LB9 341 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 TOX2Q96NM4 488 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 ACTRT3Q9BYD9 372 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 MKRN2Q9H000 416 aaKnown RBP12.69□□□□□ -0.38
POLR1B-209ENST00000448770 PRSS16Q9NQE7 514 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 MAT2BQ9NZL9 334 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 CACNG2Q9Y698 323 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 A0A1W2PPK0 400 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 A0A1W2PQ72 361 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 RFPL3O75679 317 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 SOX30O94993 753 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 GYPBP06028 91 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 ACVR1BP36896 505 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 RFX3P48380 749 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 BTG1P62324 171 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 EEF1A1P68104 462 aaKnown RBP12.69□□□□□ -0.38
POLR1B-209ENST00000448770 DGCR2P98153 550 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 ZNF85Q03923 595 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 IRF4Q15306 451 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 NTRK2Q16620 822 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 LYPD4Q6UWN0 246 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 ZNF767PQ75MW2 155 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 KRT74Q7RTS7 529 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 OR13C2Q8NGS9 318 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 OR5J2Q8NH18 312 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 TRMT10AQ8TBZ6 339 aaKnown RBP12.69□□□□□ -0.38
POLR1B-209ENST00000448770 FANK1Q8TC84 345 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 COL26A1Q96A83 441 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 TRIM43Q96BQ3 446 aaPredicted RBP12.69□□□□□ -0.38
POLR1B-209ENST00000448770 ZNF707Q96C28 371 aaPredicted RBP12.69□□□□□ -0.38
POLR1B-209ENST00000448770 AHCYL2Q96HN2 611 aaKnown RBP12.69□□□□□ -0.38
POLR1B-209ENST00000448770 GPR137Q96N19 417 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.69□□□□□ -0.38
POLR1B-209ENST00000448770 RNF208Q9H0X6 261 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 ADAM30Q9UKF2 790 aa12.69□□□□□ -0.38
POLR1B-209ENST00000448770 LOC105369274A0A096LPK9 316 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 SC5DO75845 299 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ANKRD34CP0C6C1 535 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 NPR2P20594 1047 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 WASP42768 502 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 PITPNBP48739 271 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ANXA11P50995 505 aaKnown RBP12.68□□□□□ -0.38
POLR1B-209ENST00000448770 CCR6P51684 374 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 HCCSP53701 268 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 OR12D2P58182 307 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 BTN3A2P78410 334 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 PRPF38BQ5VTL8 546 aaKnown RBP12.68□□□□□ -0.38
POLR1B-209ENST00000448770 AGBL4Q5VU57 503 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 VN1R4Q7Z5H5 301 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 OR4N4Q8N0Y3 316 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 CYB561A3Q8NBI2 242 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 OR2L8Q8NGY9 312 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ANGPTL6Q8NI99 470 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 BRIX1Q8TDN6 353 aaKnown RBP12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ADAMTS15Q8TE58 950 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ACOT12Q8WYK0 555 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 MED30Q96HR3 178 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 TEX101Q9BY14 249 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 CDCP1Q9H5V8 836 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 SIDT1Q9NXL6 827 aaKnown RBP12.68□□□□□ -0.38
POLR1B-209ENST00000448770 H2AFY2Q9P0M6 372 aaPredicted RBP12.68□□□□□ -0.38
POLR1B-209ENST00000448770 TEKT2Q9UIF3 430 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 UNC119BA6NIH7 251 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ZSCAN5BA6NJL1 495 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 PEX12O00623 359 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 SLC9A3R1O14745 358 aaPredicted RBP12.68□□□□□ -0.38
POLR1B-209ENST00000448770 MID1O15344 667 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ADH1CP00326 375 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ASGR2P07307 311 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 GALP22466 123 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 TEAD1P28347 426 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 MPIP34949 423 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ARFIP1P53367 373 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 PER3P56645 1201 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 BDH1Q02338 343 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ID2Q02363 134 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 MRPL28Q13084 256 aaKnown RBP12.68□□□□□ -0.38
POLR1B-209ENST00000448770 GALEQ14376 348 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 GPR68Q15743 365 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ZBTB37Q5TC79 503 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 CEACAM19Q7Z692 300 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ZNF687Q8N1G0 1237 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 BEST4Q8NFU0 473 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 OR8H1Q8NGG4 311 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 TTC9Q92623 222 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 YIPF5Q969M3 257 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 MOAP1Q96BY2 351 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 C4orf36Q96KX1 117 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 HYLS1Q96M11 299 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 OR51V1Q9H2C8 321 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 CLDND1Q9NY35 253 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 ELF5Q9UKW6 265 aaPredicted RBP12.68□□□□□ -0.38
POLR1B-209ENST00000448770 MGAT4AQ9UM21 535 aa12.68□□□□□ -0.38
POLR1B-209ENST00000448770 DAPL1A0PJW8 107 aa12.67□□□□□ -0.38
POLR1B-209ENST00000448770 CDHR4A6H8M9 788 aa12.67□□□□□ -0.38
POLR1B-209ENST00000448770 RNGTTO60942 597 aaKnown RBP12.67□□□□□ -0.38
POLR1B-209ENST00000448770 PCDH8O95206 1070 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms