RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 EEFSECP57772 596 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 SNTB1Q13884 538 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF141Q15928 474 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 PLPPR5Q32ZL2 321 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 NDUFAF6Q330K2 333 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 PDZK1Q5T2W1 519 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 AP1ARQ63HQ0 302 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF621Q6ZSS3 439 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 C16orf62Q7Z3J2 963 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 GGNQ86UU5 652 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 RNF130Q86XS8 419 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 GRAMD2AQ8IUY3 354 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 GTPBP8Q8N3Z3 284 aaPredicted RBP11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF614Q8N883 585 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 POC1BQ8TC44 478 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 DYDC1Q8WWB3 177 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 SMPDL3BQ92485 455 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 FIG4Q92562 907 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 ZBTB8AQ96BR9 441 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 ZFP3Q96NJ6 502 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 NMUR2Q9GZQ4 415 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 INTS9Q9NV88 658 aaKnown RBP11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 EXD2Q9NVH0 621 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 ZIM2Q9NZV7 527 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 JKAMPQ9P055 326 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 ICAM5Q9UMF0 924 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 ITPR2Q14571 2701 aa11.48□□□□□ -0.57
PRPF40A-203ENST00000448428 CENPVL1A0A0U1RR11 272 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 PRAMEF27A3QJZ7 478 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 C7orf72A4D263 438 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 SERINC4A6NH21 518 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 SLC22A20A6NK97 555 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 H3BNH8 94 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 HMGN4O00479 90 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 UGT2B17O75795 530 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 AGR2O95994 175 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 OPN1LWP04000 364 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF17P17021 662 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 UQCRC1P31930 480 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 P2RX1P51575 399 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 POLR2JP52435 117 aaKnown RBP11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 LRRC74AQ0VAA2 488 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 FUT5Q11128 374 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 TOMM34Q15785 309 aaPredicted RBP11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 FBXL19-AS1Q494R0 122 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 ATAD3BQ5T9A4 648 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 GCNT2Q8N0V5 402 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 TRIML2Q8N7C3 387 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 OR9I1Q8NGQ6 314 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 GPR119Q8TDV5 335 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 CKAP2Q8WWK9 683 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF524Q96C55 264 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 ROPN1LQ96C74 230 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 ZG16BQ96DA0 208 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF845Q96IR2 970 aaPredicted RBP11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 RNF145Q96MT1 663 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 EBF4Q9BQW3 602 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 PINK1Q9BXM7 581 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF350Q9GZX5 532 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 SAP130Q9H0E3 1048 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 SLC6A13Q9NSD5 602 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 CENPEQ02224 2701 aa11.47□□□□□ -0.57
PRPF40A-203ENST00000448428 RFXANKO14593 260 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 ZNF264O43296 627 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 EFNA2O43921 213 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 NUDT14O95848 222 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 GUSBP08236 651 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 IL11P20809 199 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 KHKP50053 298 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 KRTAP10-9P60411 292 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 RAC1P63000 192 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 TLE4Q04727 773 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 MAPK14Q16539 360 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 SGCBQ16585 318 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 COX20Q5RI15 118 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 TYW3Q6IPR3 259 aaKnown RBP11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 P4HA3Q7Z4N8 544 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 MIER2Q8N344 545 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 METTL25Q8N6Q8 603 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 RFWD2Q8NHY2 731 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 RNASE6Q93091 150 aaKnown RBP11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 VPS33AQ96AX1 596 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 LURAP1Q96LR2 239 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 SFXN3Q9BWM7 321 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 ACBD3Q9H3P7 528 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 TCF7L2Q9NQB0 619 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 STOML1Q9UBI4 398 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 KCNN3Q9UGI6 736 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 L3MBTL1Q9Y468 752 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 WDR45Q9Y484 360 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 MPDZO75970 2070 aa11.46□□□□□ -0.57
PRPF40A-203ENST00000448428 ADGRG4Q8IZF6 3080 aa11.46□□□□□ -0.58
PRPF40A-203ENST00000448428 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 A0A0J9YW62 118 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 A0A1W2PNV4 684 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 FAM234BA2RU67 622 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 EEF1E1-BLOC1S5C9J1V9 151 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 EIF1AYO14602 144 aaKnown RBP11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 ADAMDEC1O15204 470 aa11.45□□□□□ -0.58
PRPF40A-203ENST00000448428 POLR3GO15318 223 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms