RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SNRPB2P08579 225 aaKnown RBP10.79□□□□□ -0.68
RFC4-208ENST00000447345 UBTFL6P0CB48 400 aaPredicted RBP10.79□□□□□ -0.68
RFC4-208ENST00000447345 POU3F2P20265 443 aaPredicted RBP10.79□□□□□ -0.68
RFC4-208ENST00000447345 GFRA1P56159 465 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 NUP107P57740 925 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 PMPCAQ10713 525 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 NFYCQ13952 458 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 CAPRIN1Q14444 709 aaKnown RBP10.79□□□□□ -0.68
RFC4-208ENST00000447345 RGNQ15493 299 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 ZNF141Q15928 474 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 ACSF3Q4G176 576 aaPredicted RBP10.79□□□□□ -0.68
RFC4-208ENST00000447345 NHSL2Q5HYW2 709 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 AAGABQ6PD74 315 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 ENPP6Q6UWR7 440 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 PLXDC2Q6UX71 529 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 B3GNT6Q6ZMB0 384 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 SPATA21Q7Z572 469 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 MTERF4Q7Z6M4 381 aaKnown RBP10.79□□□□□ -0.68
RFC4-208ENST00000447345 C10orf111Q8N326 155 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 ITLN2Q8WWU7 325 aaPredicted RBP10.79□□□□□ -0.68
RFC4-208ENST00000447345 MAL2Q969L2 176 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 ZG16BQ96DA0 208 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 WDYHV1Q96HA8 205 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 TMEM19Q96HH6 336 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 TRNT1Q96Q11 434 aaKnown RBP10.79□□□□□ -0.68
RFC4-208ENST00000447345 TRIB1Q96RU8 372 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 PRDM14Q9GZV8 571 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 NSRP1Q9H0G5 558 aaKnown RBP10.79□□□□□ -0.68
RFC4-208ENST00000447345 SLC38A1Q9H2H9 487 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 RAD21L1Q9H4I0 556 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 IKZF5Q9H5V7 419 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 POLE3Q9NRF9 147 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 MED17Q9NVC6 651 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 LIPT1Q9Y234 373 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 CAPN7Q9Y6W3 813 aa10.79□□□□□ -0.68
RFC4-208ENST00000447345 TRBV5-3A0A0A0MS03 114 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 TMEM247A6NEH6 219 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 WIPF3A6NGB9 483 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 BCAS1O75363 584 aaPredicted RBP10.78□□□□□ -0.68
RFC4-208ENST00000447345 GLI4P10075 376 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 GABRA1P14867 456 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 MSX1P28360 303 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 LHX2P50458 406 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 P2RX1P51575 399 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 SMSP52788 366 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 MTPNP58546 118 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 TXNL4AP83876 142 aaKnown RBP10.78□□□□□ -0.68
RFC4-208ENST00000447345 FOXF1Q12946 379 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 SKP2Q13309 424 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 SELPLGQ14242 412 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 FGFBP1Q14512 234 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 CDSNQ15517 529 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 MAPK11Q15759 364 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 PLPPR5Q32ZL2 321 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 MMEL1Q495T6 779 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 GCNT6Q5T4J0 391 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 DLEU7Q6UYE1 221 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 LRRC74BQ6ZQY2 392 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 LSRQ86X29 649 aaPredicted RBP10.78□□□□□ -0.68
RFC4-208ENST00000447345 SNX32Q86XE0 403 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 CCDC71Q8IV32 467 aaPredicted RBP10.78□□□□□ -0.68
RFC4-208ENST00000447345 PM20D2Q8IYS1 436 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 OR10Q1Q8NGQ4 319 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 PHF10Q8WUB8 498 aaKnown RBP10.78□□□□□ -0.68
RFC4-208ENST00000447345 SLC38A5Q8WUX1 472 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 WDR60Q8WVS4 1066 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 SDCCAG3Q96C92 435 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 RNF145Q96MT1 663 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 PIGQQ9BRB3 760 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 CPPED1Q9BRF8 314 aaPredicted RBP10.78□□□□□ -0.68
RFC4-208ENST00000447345 TTYH2Q9BSA4 534 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 SAP130Q9H0E3 1048 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 TMEM185BQ9H7F4 350 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 ZNF337Q9Y3M9 751 aa10.78□□□□□ -0.68
RFC4-208ENST00000447345 SETXQ7Z333 2677 aaKnown RBP10.78□□□□□ -0.68
RFC4-208ENST00000447345 FAM90A27PA6NNH2 459 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 C5orf58C9J3I9 102 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 H0YC42 278 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 FBP2O00757 339 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 CLDN1O95832 211 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 OPN1LWP04000 364 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 TFPTP0C1Z6 253 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 DRD4P21917 467 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 PPIBP23284 216 aaKnown RBP10.77□□□□□ -0.69
RFC4-208ENST00000447345 CHMP24386 653 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 CRISP3P54108 245 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 TPD52P55327 224 aaPredicted RBP10.77□□□□□ -0.69
RFC4-208ENST00000447345 CLDN18P56856 261 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 FADDQ13158 208 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 MAPRE2Q15555 327 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 TOMM34Q15785 309 aaPredicted RBP10.77□□□□□ -0.69
RFC4-208ENST00000447345 REP15Q6BDI9 236 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 HIST2H2BCQ6DN03 193 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 TMEM211Q6ICI0 200 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 EIF3MQ7L2H7 374 aaKnown RBP10.77□□□□□ -0.69
RFC4-208ENST00000447345 CPLX4Q7Z7G2 160 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 ZNF808Q8N4W9 903 aaPredicted RBP10.77□□□□□ -0.69
RFC4-208ENST00000447345 POU5F2Q8N7G0 328 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 TOR1AIP2Q8NFQ8 470 aa10.77□□□□□ -0.69
RFC4-208ENST00000447345 NFKBIDQ8NI38 313 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms