RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SLC36A2Q495M3 483 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 CD276Q5ZPR3 534 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 RPL13AP3Q6NVV1 102 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 ARL9Q6T311 187 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 RANBP3LQ86VV4 465 aaPredicted RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 CCDC28AQ8IWP9 274 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 HDDC3Q8N4P3 179 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 TEX19Q8NA77 164 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 ABHD4Q8TB40 342 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 NACC2Q96BF6 587 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 TBX5Q99593 518 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 HCAR1Q9BXC0 346 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 C6orf106Q9H6K1 298 aaPredicted RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 ZFP64Q9NPA5 681 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 CMC2Q9NRP2 79 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 ELF5Q9UKW6 265 aaPredicted RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 MRPS23Q9Y3D9 190 aaKnown RBP17.74■□□□□ 0.43
SDCBP-204ENST00000447182 GPSM3Q9Y4H4 160 aa17.74■□□□□ 0.43
SDCBP-204ENST00000447182 LEUTXA8MZ59 168 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 FKTNO75072 461 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 FZD7O75084 574 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 ASGR2P07307 311 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 EPCAMP16422 314 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 BMP7P18075 431 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 DRD3P35462 400 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 CAPZA2P47755 286 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 OR10A3P58181 314 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 HSD17B12Q53GQ0 312 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 FAM27D1Q5T7N8 215 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 ZNF425Q6IV72 752 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 RFPL4BQ6ZWI9 263 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 AMIGO1Q86WK6 493 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 OR10H4Q8NGA5 316 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 OR11H7Q8NGC8 314 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 TRMT10AQ8TBZ6 339 aaKnown RBP17.73■□□□□ 0.43
SDCBP-204ENST00000447182 HSD17B8Q92506 261 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 MARVELD3Q96A59 401 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 PHF21AQ96BD5 680 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 OR2M2Q96R28 347 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 NUDT15Q9NV35 164 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 NPFFR2Q9Y5X5 522 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 RNF215Q9Y6U7 377 aa17.73■□□□□ 0.43
SDCBP-204ENST00000447182 A0A1W2PQ72 361 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 PRR19A6NJB7 356 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 E9PI62 339 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 ACRP10323 421 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 MAKP20794 623 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 PEBP1P30086 187 aaKnown RBP17.72■□□□□ 0.43
SDCBP-204ENST00000447182 PER3P56645 1201 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 KRT33BQ14525 404 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 CCNJQ5T5M9 372 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 CEACAM19Q7Z692 300 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 ASPGQ86U10 573 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 OR2L13Q8N349 312 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 LRRC25Q8N386 305 aaPredicted RBP17.72■□□□□ 0.43
SDCBP-204ENST00000447182 PTP4A1Q93096 173 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 TEAD3Q99594 435 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 ENKD1Q9H0I2 346 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 COPZ2Q9P299 210 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 ZNF624Q9P2J8 865 aaPredicted RBP17.72■□□□□ 0.43
SDCBP-204ENST00000447182 ZMIZ1Q9ULJ6 1067 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 FAM86C2PA6NEL3 165 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 SLC9B1P1A6NJY1 282 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 ICMTO60725 284 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 RCBTB2O95199 551 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 VIPR2P41587 438 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 WDR88Q6ZMY6 472 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 SAMD14Q8IZD0 417 aaPredicted RBP17.72■□□□□ 0.43
SDCBP-204ENST00000447182 SUN5Q8TC36 379 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 ZNF431Q8TF32 576 aaPredicted RBP17.72■□□□□ 0.43
SDCBP-204ENST00000447182 ZNF296Q8WUU4 475 aaPredicted RBP17.72■□□□□ 0.43
SDCBP-204ENST00000447182 TMEM239Q8WW34 195 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 PGLYRP3Q96LB9 341 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 RNF208Q9H0X6 261 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 ATP13A2Q9NQ11 1180 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 SLCO1C1Q9NYB5 712 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 KCNK6Q9Y257 313 aa17.72■□□□□ 0.43
SDCBP-204ENST00000447182 LATO43561 262 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 PCDH8O95206 1070 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 LYPD3O95274 346 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 TCRBP04435 133 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 ANXA3P12429 323 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 RPS4Y1P22090 263 aaKnown RBP17.71■□□□□ 0.43
SDCBP-204ENST00000447182 CMPK1P30085 196 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 MMP15P51511 669 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 RAG2P55895 527 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 BTN3A2P78410 334 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 E2F1Q01094 437 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 FOXK2Q01167 660 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 KLHL12Q53G59 568 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 AGBL4Q5VU57 503 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 KRT74Q7RTS7 529 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 ZNF655Q8N720 491 aaPredicted RBP17.71■□□□□ 0.43
SDCBP-204ENST00000447182 OR8H1Q8NGG4 311 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 GAL3ST3Q96A11 431 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 SDF2Q99470 211 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 SPHK1Q9NYA1 384 aa17.71■□□□□ 0.43
SDCBP-204ENST00000447182 TRAV6A0A075B6T7 132 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 LINC00862A6NCI5 91 aa17.71■□□□□ 0.42
SDCBP-204ENST00000447182 PRR23D1E9PI22 279 aaPredicted RBP17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms