RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 LRIF1Q5T3J3 769 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 NAXEQ8NCW5 288 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 TNIP2Q8NFZ5 429 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 XAGE5Q8WWM1 108 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 VPS33AQ96AX1 596 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 TRIB1Q96RU8 372 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 ZNF559Q9BR84 538 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 FGFR1OP2Q9NVK5 253 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 MED11Q9P086 117 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 CCDC167Q9P0B6 97 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 DTNAQ9Y4J8 743 aa16.48■□□□□ 0.23
SMPD4-210ENST00000441135 POLQO75417 2590 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 MED12Q93074 2177 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 A0A096LPI6 279 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 MBD3L4A6NDZ8 208 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-210ENST00000441135 MBD3L3A6NE82 208 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-210ENST00000441135 MBD3L5A6NJ08 208 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-210ENST00000441135 ANP32DO95626 131 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 VIMP08670 466 aaKnown RBP16.47■□□□□ 0.23
SMPD4-210ENST00000441135 ZNF17P17021 662 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 HOXB9P17482 250 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-210ENST00000441135 BMP5P22003 454 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 ASCL1P50553 236 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 MVDP53602 400 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 B3GALT5-AS1P59052 145 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 TMEM44Q2T9K0 475 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 FBXL19-AS1Q494R0 122 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 C6orf10Q5SRN2 563 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 TOR1AIP2Q8NFQ8 470 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 MBD3L2Q8NHZ7 208 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-210ENST00000441135 ROPN1LQ96C74 230 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 SFXN2Q96NB2 322 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 TRNT1Q96Q11 434 aaKnown RBP16.47■□□□□ 0.23
SMPD4-210ENST00000441135 PIGQQ9BRB3 760 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 TMEM120AQ9BXJ8 343 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 PAIP1Q9H074 479 aaKnown RBP16.47■□□□□ 0.23
SMPD4-210ENST00000441135 RAD21L1Q9H4I0 556 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 TPT1P8Q9HAU6 139 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 SLC6A13Q9NSD5 602 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 L3MBTL1Q9Y468 752 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 WDR45Q9Y484 360 aa16.47■□□□□ 0.23
SMPD4-210ENST00000441135 INTS1Q8N201 2190 aaKnown RBP16.47■□□□□ 0.23
SMPD4-210ENST00000441135 HCFC1P51610 2035 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 A0A1W2PP18 115 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 C17orf51A8MQB3 221 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 H0Y3Z8 333 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 DYNC1I1O14576 645 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 EIF4E2O60573 245 aaKnown RBP16.46■□□□□ 0.23
SMPD4-210ENST00000441135 GSNP06396 782 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 HK1P19367 917 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 NCF2P19878 526 aaPredicted RBP16.46■□□□□ 0.23
SMPD4-210ENST00000441135 KRTAP10-9P60411 292 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 HPCAP84074 193 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 FUT5Q11128 374 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 CD226Q15762 336 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 AGKQ53H12 422 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMPD4-210ENST00000441135 ARSKQ6UWY0 536 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 DNAJC14Q6Y2X3 702 aaPredicted RBP16.46■□□□□ 0.23
SMPD4-210ENST00000441135 LRRC74BQ6ZQY2 392 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 RELL2Q8NC24 303 aaPredicted RBP16.46■□□□□ 0.23
SMPD4-210ENST00000441135 B4GALNT2Q8NHY0 566 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 RAB8BQ92930 207 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 ZBTB8AQ96BR9 441 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 THOC1Q96FV9 657 aaKnown RBP16.46■□□□□ 0.23
SMPD4-210ENST00000441135 ZFP3Q96NJ6 502 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 ZNF317Q96PQ6 595 aaPredicted RBP16.46■□□□□ 0.23
SMPD4-210ENST00000441135 UCN2Q96RP3 112 aa16.46■□□□□ 0.23
SMPD4-210ENST00000441135 FOXD3Q9UJU5 478 aaPredicted RBP16.46■□□□□ 0.23
SMPD4-210ENST00000441135 KDM4EB2RXH2 506 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-210ENST00000441135 SYT5O00445 386 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 NR5A2O00482 541 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 FCMRO60667 390 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 UGT2B17O75795 530 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 IL18BPO95998 194 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 BMP2P12643 396 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 PEPDP12955 493 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 ZNF708P17019 499 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 PPIBP23284 216 aaKnown RBP16.45■□□□□ 0.22
SMPD4-210ENST00000441135 OPRM1P35372 400 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 LHX2P50458 406 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 ZNF136P52737 540 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 ARFIP2P53365 341 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 DLX5P56178 289 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 FADDQ13158 208 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 TYW3Q6IPR3 259 aaKnown RBP16.45■□□□□ 0.22
SMPD4-210ENST00000441135 CGB2Q6NT52 195 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 SLC2A7Q6PXP3 512 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 FRRS1Q6ZNA5 592 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 CDH24Q86UP0 819 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 ZNF619Q8N2I2 560 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 GTPBP8Q8N3Z3 284 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-210ENST00000441135 PHOSPHO1Q8TCT1 267 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 RNASE6Q93091 150 aaKnown RBP16.45■□□□□ 0.22
SMPD4-210ENST00000441135 ARSGQ96EG1 525 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 TM9SF2Q99805 663 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 CALML5Q9NZT1 146 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 KLHL14Q9P2G3 628 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 ICAM5Q9UMF0 924 aa16.45■□□□□ 0.22
SMPD4-210ENST00000441135 PCDHB14Q9Y5E9 798 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms