RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 STARD8Q92502 1023 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 KAT2AQ92830 837 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 NCLNQ969V3 563 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMBIM1Q969X1 311 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF707Q96C28 371 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 SLC47A1Q96FL8 570 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 DTD2Q96FN9 168 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 AURKBQ96GD4 344 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PYURFQ96I23 114 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PPP1R16AQ96I34 528 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 METTL2AQ96IZ6 378 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF514Q96K75 400 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 FCRL1Q96LA6 429 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 RDH12Q96NR8 316 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 LRRC3BQ96PB8 259 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PKP4Q99569 1192 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 SH3GL3Q99963 347 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 INPP5KQ9BT40 448 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 TBCDQ9BTW9 1192 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 WRAP53Q9BUR4 548 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 MAGIXQ9H6Y5 334 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 KAT8Q9H7Z6 458 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 NTN4Q9HB63 628 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 SGK2Q9HBY8 427 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 DCAF13Q9NV06 445 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 USE1Q9NZ43 259 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PTTG2Q9NZH5 202 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 STOX2Q9P2F5 926 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 DEC1Q9P2X7 70 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 VPS29Q9UBQ0 182 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 DNAJB9Q9UBS3 223 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 RSL24D1Q9UHA3 163 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 FBXO4Q9UKT5 387 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ICAM5Q9UMF0 924 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PCDHGB1Q9Y5G3 927 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CEPT1Q9Y6K0 416 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 V9GYQ6 96 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CHD5Q8TDI0 1954 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 LTBP2Q14767 1821 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 MICAL3Q7RTP6 2002 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 A0A1W2PR77 199 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 MGAT4DA6NG13 374 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM202A6NGA9 273 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRIM64A6NGJ6 449 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRIM64CA6NLI5 447 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 GABRR3A8MPY1 467 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 MAGEB17A8MXT2 336 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 USP17L23D6RBM5 183 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 E7EQ34 232 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 UPK1AO00322 258 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 SCAMP2O15127 329 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ADAMDEC1O15204 470 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 HCRTR2O43614 444 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 VEGFDO43915 354 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 SCN2BO60939 215 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 E2F6O75461 281 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 POP7O75817 140 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 KCNK5O95279 499 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 SNAP29O95721 258 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 SERPINA1P01009 418 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 MT-ND1P03886 318 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 HOXB5P09067 269 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 GNAO1P09471 354 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ANXA4P09525 319 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 C1GALT1C1LP0DN25 315 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 THRBP10828 461 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 HLA-EP13747 358 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ADRB3P13945 408 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ETS2P15036 469 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 GPX2P18283 190 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CD22P20273 847 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 IDSP22304 550 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PPIBP23284 216 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CALRP27797 417 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 IMPA1P29218 277 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PTPN6P29350 595 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PDHA2P29803 388 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PBLDP30039 288 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TIA1P31483 386 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 RPL3P39023 403 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CDKN2CP42773 168 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 BDKRB1P46663 353 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CAMPP49913 170 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CDK9P50750 372 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ARHGDIAP52565 204 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ARSFP54793 590 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 TPD52P55327 224 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 CLDN2P57739 230 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PHEXP78562 749 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ACSM2AQ08AH3 577 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 DDX39BQ13838 428 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PDGFRLQ15198 375 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 RBBP5Q15291 538 aaKnown RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ADIPOQQ15848 244 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 COL28A1Q2UY09 1125 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 POM121L1PQ3SYA9 428 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 PLK5Q496M5 336 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZBED5Q49AG3 693 aa3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF658BQ4V348 819 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P11-201ENST00000440127 BCL7AQ4VC05 210 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms