RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 C20orf27Q9GZN8 174 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 RNF122Q9H9V4 155 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 PROCRQ9UNN8 238 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 EMC9Q9Y3B6 208 aa17.86■□□□□ 0.45
SHROOM1-204ENST00000440118 TMEM120BA0PK00 339 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 DUXAA6NLW8 204 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 A8MXE2 369 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 CPSF4O95639 269 aaKnown RBP17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 MATN1P21941 496 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 DNASE1P24855 282 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 EIF1P41567 113 aaKnown RBP17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 CTBP2P56545 445 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 MPP2Q14168 576 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 DAZAP2Q15038 168 aaPredicted RBP17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 POU4F3Q15319 338 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 TMEM44Q2T9K0 475 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 ANXA8L1Q5VT79 327 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 MED13LQ71F56 2210 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 C6orf120Q7Z4R8 191 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 GGNQ86UU5 652 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 CLEC4FQ8N1N0 589 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 OR10D3Q8NH80 312 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 RFWD2Q8NHY2 731 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 STARD4Q96DR4 205 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 DACH2Q96NX9 599 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 OPN3Q9H1Y3 402 aaPredicted RBP17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 EXD2Q9NVH0 621 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 PNPOQ9NVS9 261 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 NKIRAS1Q9NYS0 192 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 CARD8Q9Y2G2 431 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 PLEKHA6Q9Y2H5 1048 aa17.85■□□□□ 0.45
SHROOM1-204ENST00000440118 C7orf72A4D263 438 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 TNFSF11O14788 317 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 AK1P00568 194 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 POU2F1P14859 743 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 SFTPDP35247 375 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 CHI3L1P36222 383 aaPredicted RBP17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 IST1P53990 364 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 ATP12AP54707 1039 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 SUMO3P55854 103 aaPredicted RBP17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 NME5P56597 212 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 RAC1P63000 192 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 OCRLQ01968 901 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 FOXF1Q12946 379 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 GPR68Q15743 365 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 DPY19L1Q2PZI1 675 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 TNFAIP8L3Q5GJ75 292 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 ATAD3BQ5T9A4 648 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 HBMQ6B0K9 141 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 ESPNLQ6ZVH7 1005 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 BTLAQ7Z6A9 289 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 OR8J2Q8NGG1 315 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 OR2V1Q8NHB1 315 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 NINJ1Q92982 152 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 REXO5Q96IC2 774 aaKnown RBP17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 MEAF6Q9HAF1 191 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 MARCOQ9UEW3 520 aaPredicted RBP17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 ST6GALNAC2Q9UJ37 374 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 DTNAQ9Y4J8 743 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 KCNE3Q9Y6H6 103 aa17.84■□□□□ 0.45
SHROOM1-204ENST00000440118 HIVEP1P15822 2718 aa17.83■□□□□ 0.45
SHROOM1-204ENST00000440118 GJE1A6NN92 205 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 CXCL13O43927 109 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 CYP7B1O75881 506 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 AQP8O94778 261 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 GOSR1O95249 250 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 UBL4AP11441 157 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 S100A3P33764 101 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 CD79BP40259 229 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 KIR2DL2P43627 348 aaPredicted RBP17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 P2RX1P51575 399 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 HPCAP84074 193 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 KLHL26Q53HC5 615 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 LRRC34Q8IZ02 419 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 LILRA2Q8N149 483 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 TESCQ96BS2 214 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 KLHL15Q96M94 604 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 MED18Q9BUE0 208 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 CCM2LQ9NUG4 571 aaPredicted RBP17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 HAO1Q9UJM8 370 aa17.83■□□□□ 0.44
SHROOM1-204ENST00000440118 TRPC5OSA6NMA1 111 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 E9PBE3 544 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 STX11O75558 287 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 AGR2O95994 175 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 KITP10721 976 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 ELK4P28324 431 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 CASP9P55211 416 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 FAM27E3Q08E93 113 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 EXOC3L2Q2M3D2 409 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 NDUFAF6Q330K2 333 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 FAM174BQ3ZCQ3 159 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 SPANXN4Q5MJ08 99 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 PDZK1Q5T2W1 519 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 ATG16L1Q676U5 607 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 TNFAIP8L2Q6P589 184 aaPredicted RBP17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 CBLN3Q6UW01 205 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 SPNS3Q6ZMD2 512 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 FAM214BQ7L5A3 538 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 ATP6V1C2Q8NEY4 427 aa17.82■□□□□ 0.44
SHROOM1-204ENST00000440118 TOR1AIP2Q8NFQ8 470 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms