RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 UBL4AP11441 157 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 ESRRAP11474 423 aaPredicted RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 GPX2P18283 190 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 RPS4Y1P22090 263 aaKnown RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 CHMP24386 653 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 PSMA4P25789 261 aaKnown RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 ACVR2AP27037 513 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 MSX1P28360 303 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 ADH7P40394 386 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 LHX2P50458 406 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 ANXA11P50995 505 aaKnown RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 TPD52P55327 224 aaPredicted RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 CLDN15P56746 228 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 CLDN18P56856 261 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 SKP2Q13309 424 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 NFYCQ13952 458 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 CAPRIN1Q14444 709 aaKnown RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 FGFBP1Q14512 234 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 ADRM1Q16186 407 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 ZNF630Q2M218 657 aaPredicted RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 PLPPR5Q32ZL2 321 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 PLXDC2Q6UX71 529 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 SEM1Q6ZVN7 128 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 MTERF4Q7Z6M4 381 aaKnown RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 MTDHQ86UE4 582 aaKnown RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 LSRQ86X29 649 aaPredicted RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 SNX32Q86XE0 403 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 TREML1Q86YW5 311 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 MISPQ8IVT2 679 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 GPR119Q8TDV5 335 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 ITLN2Q8WWU7 325 aaPredicted RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 TMEM19Q96HH6 336 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 ANKRD27Q96NW4 1050 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 CGREF1Q99674 301 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 PTGES2Q9H7Z7 377 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 MTHFD2LQ9H903 347 aaPredicted RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 A4GALTQ9NPC4 353 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 MED17Q9NVC6 651 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 CAMK2AQ9UQM7 478 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 DSPPQ9NZW4 1301 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 ASH1LQ9NR48 2969 aaKnown RBP9.47□□□□□ -0.89
UBE2F-213ENST00000439780 HECTD1Q9ULT8 2610 aa9.47□□□□□ -0.89
UBE2F-213ENST00000439780 KIAA1549Q9HCM3 1950 aa9.46□□□□□ -0.89
UBE2F-213ENST00000439780 H3BNH8 94 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 FXYD1O00168 92 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 ZNF264O43296 627 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 EIF4E2O60573 245 aaKnown RBP9.46□□□□□ -0.9
UBE2F-213ENST00000439780 DNAJA2O60884 412 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 WDR1O75083 606 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 TOXO94900 526 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 CLDN1O95832 211 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 CSTAP01040 98 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 LINGO3P0C6S8 592 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 GLI4P10075 376 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 CPN1P15169 458 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 ZNF708P17019 499 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 IL11P20809 199 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 ADSLP30566 484 aaPredicted RBP9.46□□□□□ -0.9
UBE2F-213ENST00000439780 PGM1P36871 562 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 P2RX1P51575 399 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 SUCLG1P53597 346 aaKnown RBP9.46□□□□□ -0.9
UBE2F-213ENST00000439780 NUP107P57740 925 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 MTPNP58546 118 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 SRYQ05066 204 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 PMPCAQ10713 525 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 FADDQ13158 208 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 GANABQ14697 944 aaKnown RBP9.46□□□□□ -0.9
UBE2F-213ENST00000439780 GLYR1Q49A26 553 aaPredicted RBP9.46□□□□□ -0.9
UBE2F-213ENST00000439780 ACSF3Q4G176 576 aaPredicted RBP9.46□□□□□ -0.9
UBE2F-213ENST00000439780 C1orf185Q5T7R7 199 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 RAET1LQ5VY80 246 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 REP15Q6BDI9 236 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 RPTNQ6XPR3 784 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 PIGWQ7Z7B1 504 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 CPLX4Q7Z7G2 160 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 VRK2Q86Y07 508 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 POU5F2Q8N7G0 328 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 FAM71CQ8NEG0 241 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 PHF10Q8WUB8 498 aaKnown RBP9.46□□□□□ -0.9
UBE2F-213ENST00000439780 CNOT9Q92600 299 aaKnown RBP9.46□□□□□ -0.9
UBE2F-213ENST00000439780 TREX2Q9BQ50 279 aaPredicted RBP9.46□□□□□ -0.9
UBE2F-213ENST00000439780 TUBA1CQ9BQE3 449 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 SLC39A3Q9BRY0 314 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 TTYH2Q9BSA4 534 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 CCDC106Q9BWC9 280 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 LAT2Q9GZY6 243 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 MYLK2Q9H1R3 596 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 RAD21L1Q9H4I0 556 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 P2RX2Q9UBL9 471 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 CHST2Q9Y4C5 530 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 CAPN7Q9Y6W3 813 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 PCNX1Q96RV3 2341 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 PTPN13Q12923 2485 aa9.46□□□□□ -0.9
UBE2F-213ENST00000439780 NCOA6Q14686 2063 aaPredicted RBP9.46□□□□□ -0.9
UBE2F-213ENST00000439780 SPTAN1Q13813 2472 aaKnown RBP9.45□□□□□ -0.9
UBE2F-213ENST00000439780 HEATR5AQ86XA9 2040 aa9.45□□□□□ -0.9
UBE2F-213ENST00000439780 A0A087WZY1 265 aa9.45□□□□□ -0.9
UBE2F-213ENST00000439780 A1L4Q6 167 aa9.45□□□□□ -0.9
UBE2F-213ENST00000439780 FIGNL2A6NMB9 653 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms