RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 A0A096LPK6 155 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMEM213A2RRL7 107 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 FUOMA2VDF0 154 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 MYMKA6NI61 221 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 VWC2LB2RUY7 222 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 C17orf105B2RV13 164 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ARPC1BO15143 372 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 XRCC2O43543 280 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 AIREO43918 545 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 TPST2O60704 377 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ACTL6AO96019 429 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ASS1P00966 412 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 CRYABP02511 175 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 VTNP04004 478 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 RAF1P04049 648 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 CT62P0C5K7 136 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 COX5BP10606 129 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF43P17038 809 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 NDUFB7P17568 137 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 PSMB5P28074 263 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 CHATP28329 748 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 RBMS1P29558 406 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 DUTP33316 252 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 MAS1LP35410 378 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ACVR1BP36896 505 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 NR4A2P43354 598 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 PLK1P53350 603 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 MAZP56270 477 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ATP6V0D1P61421 351 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 MRPS25P82663 173 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 PITPNAQ00169 270 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 OGDHQ02218 1023 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 C1orf61Q13536 156 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 MESDQ14696 234 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 SLC17A1Q14916 467 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 SPCS2Q15005 226 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 EIF2S3LQ2VIR3 472 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ANXA2RQ3ZCQ2 193 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 PTPN20Q4JDL3 420 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ARMCX4Q5H9R4 360 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 AARS2Q5JTZ9 985 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 TCHHL1Q5QJ38 904 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 SEL1L2Q5TEA6 688 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 FAM109BQ6ICB4 259 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 C11orf63Q6NUN7 778 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 KIRREL2Q6UWL6 708 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 C19orf35Q6ZS72 473 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 HDDC2Q7Z4H3 204 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 TAC4Q86UU9 113 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 SLC51BQ86UW2 128 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 TRIM69Q86WT6 500 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ERICH1Q86X53 443 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 GID4Q8IVV7 300 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 GPALPP1Q8IXQ4 340 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF100Q8IYN0 542 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 EMC1Q8N766 993 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 LINC01465Q8N7H1 131 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 CNBD1Q8NA66 436 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 NECAP1Q8NC96 275 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF548Q8NEK5 533 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 SPATA22Q8NHS9 363 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 PPP4R1Q8TF05 950 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 DNAJB3Q8WWF6 145 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMEM37Q8WXS4 190 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 SMARCD2Q92925 531 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ERGIC1Q969X5 290 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 BIRC7Q96CA5 298 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 METTL2AQ96IZ6 378 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 OPALINQ96PE5 141 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 CSPG4P5Q96PW8 444 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 TNFRSF13CQ96RJ3 184 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 MBOAT4Q96T53 435 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 CGREF1Q99674 301 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 BTBD10Q9BSF8 475 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 POLDIP3Q9BY77 421 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 NEUROG2Q9H2A3 272 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 C10orf88Q9H8K7 445 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 NOX4Q9NPH5 578 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 INPP5EQ9NRR6 644 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 ECHDC1Q9NTX5 307 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 RCC2Q9P258 522 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 B3GAT1Q9P2W7 334 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 PLEKHB1Q9UF11 243 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 PRPF19Q9UMS4 504 aaKnown RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMED3Q9Y3Q3 217 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 SIRT4Q9Y6E7 314 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 PTPRUQ92729 1446 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 CPDO75976 1380 aa3.25□□□□□ -1.89
HMGB1P12-201ENST00000438594 AFF2P51816 1311 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 PCDH11YQ9BZA8 1340 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 FANCIQ9NVI1 1328 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 ATP6AP2A0A1C7CYW4 349 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMEM238C9JI98 176 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 FAM90A26D6RGX4 464 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 E5RI56 91 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 E7EWF7 191 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 F8VP50 259 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 H0YL77 283 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 H3BTX0 84 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms