RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 OR56A1Q8NGH5 318 aa8.8□□□□□ -1
CUX1-206ENST00000437600 DIO2Q92813 273 aa8.8□□□□□ -1
CUX1-206ENST00000437600 SLC41A3Q96GZ6 507 aa8.8□□□□□ -1
CUX1-206ENST00000437600 TRNT1Q96Q11 434 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 NELL2Q99435 816 aa8.8□□□□□ -1
CUX1-206ENST00000437600 OR51V1Q9H2C8 321 aa8.8□□□□□ -1
CUX1-206ENST00000437600 TP63Q9H3D4 680 aaPredicted RBP8.8□□□□□ -1
CUX1-206ENST00000437600 BCL2L10Q9HD36 194 aa8.8□□□□□ -1
CUX1-206ENST00000437600 TXNL4BQ9NX01 149 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 WBP11Q9Y2W2 641 aaKnown RBP8.8□□□□□ -1
CUX1-206ENST00000437600 HS3ST3A1Q9Y663 406 aa8.8□□□□□ -1
CUX1-206ENST00000437600 ZFHX2Q9C0A1 2572 aaPredicted RBP8.79□□□□□ -1
CUX1-206ENST00000437600 DCHS1Q96JQ0 3298 aa8.79□□□□□ -1
CUX1-206ENST00000437600 TRAV27A0A087WT01 109 aa8.79□□□□□ -1
CUX1-206ENST00000437600 A0A1W2PPK0 400 aa8.79□□□□□ -1
CUX1-206ENST00000437600 RDH16O75452 317 aa8.79□□□□□ -1
CUX1-206ENST00000437600 HOXC4P09017 264 aaPredicted RBP8.79□□□□□ -1
CUX1-206ENST00000437600 SMIM11AP58511 58 aa8.79□□□□□ -1
CUX1-206ENST00000437600 TRA2BP62995 288 aaKnown RBP8.79□□□□□ -1
CUX1-206ENST00000437600 LPAL2Q16609 132 aa8.79□□□□□ -1
CUX1-206ENST00000437600 NDUFAF6Q330K2 333 aa8.79□□□□□ -1
CUX1-206ENST00000437600 GXYLT1Q4G148 440 aa8.79□□□□□ -1
CUX1-206ENST00000437600 NXNL2Q5VZ03 156 aa8.79□□□□□ -1
CUX1-206ENST00000437600 ZNF836Q6ZNA1 936 aa8.79□□□□□ -1
CUX1-206ENST00000437600 AKAP14Q86UN6 197 aa8.79□□□□□ -1
CUX1-206ENST00000437600 GATAD2AQ86YP4 633 aa8.79□□□□□ -1
CUX1-206ENST00000437600 FAM26EQ8N5C1 309 aa8.79□□□□□ -1
CUX1-206ENST00000437600 SPATA5L1Q9BVQ7 753 aa8.79□□□□□ -1
CUX1-206ENST00000437600 MAT2BQ9NZL9 334 aa8.79□□□□□ -1
CUX1-206ENST00000437600 A0A1W2PQL4 384 aaPredicted RBP8.79□□□□□ -1
CUX1-206ENST00000437600 SHISA3A0PJX4 238 aa8.79□□□□□ -1
CUX1-206ENST00000437600 CD8B2A6NJW9 211 aa8.79□□□□□ -1
CUX1-206ENST00000437600 SNPHO15079 494 aa8.79□□□□□ -1
CUX1-206ENST00000437600 MRPS14O60783 128 aaKnown RBP8.79□□□□□ -1
CUX1-206ENST00000437600 RFPL3O75679 317 aa8.79□□□□□ -1
CUX1-206ENST00000437600 LIMS3P0CW19 117 aa8.79□□□□□ -1
CUX1-206ENST00000437600 LIMS4P0CW20 117 aa8.79□□□□□ -1
CUX1-206ENST00000437600 CD8BP10966 210 aa8.79□□□□□ -1
CUX1-206ENST00000437600 MYL12AP19105 171 aa8.79□□□□□ -1
CUX1-206ENST00000437600 CDH11P55287 796 aa8.79□□□□□ -1
CUX1-206ENST00000437600 FABP5Q01469 135 aa8.79□□□□□ -1
CUX1-206ENST00000437600 ST3GAL3Q11203 375 aa8.79□□□□□ -1
CUX1-206ENST00000437600 KIR2DS3Q14952 304 aa8.79□□□□□ -1
CUX1-206ENST00000437600 MRPL2Q5T653 305 aaKnown RBP8.79□□□□□ -1
CUX1-206ENST00000437600 LINC00469Q8N7U9 141 aa8.79□□□□□ -1
CUX1-206ENST00000437600 SRFBP1Q8NEF9 429 aaKnown RBP8.79□□□□□ -1
CUX1-206ENST00000437600 CLDN23Q96B33 292 aa8.79□□□□□ -1
CUX1-206ENST00000437600 SECISBP2Q96T21 854 aaKnown RBP8.79□□□□□ -1
CUX1-206ENST00000437600 BCL7BQ9BQE9 202 aa8.79□□□□□ -1
CUX1-206ENST00000437600 SLC30A2Q9BRI3 323 aa8.79□□□□□ -1
CUX1-206ENST00000437600 IER2Q9BTL4 223 aa8.79□□□□□ -1
CUX1-206ENST00000437600 MND1Q9BWT6 205 aa8.79□□□□□ -1
CUX1-206ENST00000437600 PINK1Q9BXM7 581 aa8.79□□□□□ -1
CUX1-206ENST00000437600 POLDIP3Q9BY77 421 aaKnown RBP8.79□□□□□ -1
CUX1-206ENST00000437600 MMP28Q9H239 520 aa8.79□□□□□ -1
CUX1-206ENST00000437600 NLGN3Q9NZ94 848 aa8.79□□□□□ -1
CUX1-206ENST00000437600 TESQ9UGI8 421 aaKnown RBP8.79□□□□□ -1
CUX1-206ENST00000437600 ENOPH1Q9UHY7 261 aa8.79□□□□□ -1
CUX1-206ENST00000437600 SSR3Q9UNL2 185 aa8.79□□□□□ -1
CUX1-206ENST00000437600 LRP4O75096 1905 aa8.79□□□□□ -1
CUX1-206ENST00000437600 FAM86C2PA6NEL3 165 aa8.78□□□□□ -1
CUX1-206ENST00000437600 B3GALT2O43825 422 aa8.78□□□□□ -1
CUX1-206ENST00000437600 SERPINI2O75830 405 aa8.78□□□□□ -1
CUX1-206ENST00000437600 MAKP20794 623 aa8.78□□□□□ -1
CUX1-206ENST00000437600 HTR2AP28223 471 aa8.78□□□□□ -1
CUX1-206ENST00000437600 SLC9A3P48764 834 aa8.78□□□□□ -1
CUX1-206ENST00000437600 GAS1P54826 345 aa8.78□□□□□ -1
CUX1-206ENST00000437600 RPS15AP62244 130 aaKnown RBP8.78□□□□□ -1
CUX1-206ENST00000437600 C1DQ13901 141 aaKnown RBP8.78□□□□□ -1
CUX1-206ENST00000437600 TRAM2Q15035 370 aa8.78□□□□□ -1
CUX1-206ENST00000437600 FAM27D1Q5T7N8 215 aa8.78□□□□□ -1
CUX1-206ENST00000437600 NKAIN2Q5VXU1 208 aa8.78□□□□□ -1
CUX1-206ENST00000437600 LAPTM4BQ86VI4 370 aa8.78□□□□□ -1
CUX1-206ENST00000437600 GLCCI1Q86VQ1 547 aa8.78□□□□□ -1
CUX1-206ENST00000437600 TMEM151BQ8IW70 566 aa8.78□□□□□ -1
CUX1-206ENST00000437600 NATD1Q8N6N6 113 aa8.78□□□□□ -1
CUX1-206ENST00000437600 MINDY2Q8NBR6 621 aa8.78□□□□□ -1
CUX1-206ENST00000437600 PROKR2Q8NFJ6 384 aa8.78□□□□□ -1
CUX1-206ENST00000437600 LILRB4Q8NHJ6 448 aa8.78□□□□□ -1
CUX1-206ENST00000437600 SLC22A18Q96BI1 424 aa8.78□□□□□ -1
CUX1-206ENST00000437600 ZFYVE21Q9BQ24 234 aa8.78□□□□□ -1
CUX1-206ENST00000437600 CCDC3Q9BQI4 270 aa8.78□□□□□ -1
CUX1-206ENST00000437600 TRIM45Q9H8W5 580 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 HINT3Q9NQE9 182 aaKnown RBP8.78□□□□□ -1
CUX1-206ENST00000437600 UCKL1Q9NWZ5 548 aa8.78□□□□□ -1
CUX1-206ENST00000437600 HCN3Q9P1Z3 774 aa8.78□□□□□ -1
CUX1-206ENST00000437600 CFAP47Q6ZTR5 3102 aa8.78□□□□□ -1
CUX1-206ENST00000437600 A0A0A6YYC8 382 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 ARRDC5A6NEK1 342 aa8.78□□□□□ -1
CUX1-206ENST00000437600 SLC9B1P1A6NJY1 282 aa8.78□□□□□ -1
CUX1-206ENST00000437600 I3L1I5 382 aaPredicted RBP8.78□□□□□ -1
CUX1-206ENST00000437600 IMPA2O14732 288 aa8.78□□□□□ -1
CUX1-206ENST00000437600 RAB36O95755 333 aa8.78□□□□□ -1
CUX1-206ENST00000437600 TBXA2RP21731 343 aa8.78□□□□□ -1
CUX1-206ENST00000437600 RPS7P62081 194 aaKnown RBP8.78□□□□□ -1
CUX1-206ENST00000437600 UBE2IP63279 158 aaKnown RBP8.78□□□□□ -1
CUX1-206ENST00000437600 EFNB1P98172 346 aa8.78□□□□□ -1
CUX1-206ENST00000437600 RHAGQ02094 409 aa8.78□□□□□ -1
CUX1-206ENST00000437600 TNFRSF17Q02223 184 aa8.78□□□□□ -1
CUX1-206ENST00000437600 COX10Q12887 443 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms