RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 L3MBTL1Q9Y468 752 aa14.09□□□□□ -0.15
TREX1-201ENST00000433541 PHF3Q92576 2039 aaKnown RBP14.08□□□□□ -0.15
TREX1-201ENST00000433541 TRBV5-3A0A0A0MS03 114 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 PRAMEF27A3QJZ7 478 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 NPIPB9F8W1W9 429 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 H0Y3Z8 333 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 H3BML4 177 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 EIF4E2O60573 245 aaKnown RBP14.08□□□□□ -0.16
TREX1-201ENST00000433541 SEMA7AO75326 666 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 ACTL6AO96019 429 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 DBIP07108 87 aaKnown RBP14.08□□□□□ -0.16
TREX1-201ENST00000433541 BMP7P18075 431 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 POU3F2P20265 443 aaPredicted RBP14.08□□□□□ -0.16
TREX1-201ENST00000433541 SLC6A2P23975 617 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 ART3Q13508 389 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 CBFBQ13951 182 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 SCARB2Q14108 478 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 FGFBP1Q14512 234 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 MAPK14Q16539 360 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 COQ5Q5HYK3 327 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 MTFR2Q6P444 385 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 Q6ZPB1 254 aaPredicted RBP14.08□□□□□ -0.16
TREX1-201ENST00000433541 CHMP1BQ7LBR1 199 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 KRT73Q86Y46 540 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 DOLPP1Q86YN1 238 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 PM20D2Q8IYS1 436 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 UBQLNLQ8IYU4 475 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 OR52P1PQ8NH57 321 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 BBS10Q8TAM1 723 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 LRRC58Q96CX6 371 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 CMTM5Q96DZ9 223 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 LRRC37BQ96QE4 947 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 TREX2Q9BQ50 279 aaPredicted RBP14.08□□□□□ -0.16
TREX1-201ENST00000433541 ECSITQ9BQ95 431 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 CCDC106Q9BWC9 280 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 UGT2B28Q9BY64 529 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 SAP130Q9H0E3 1048 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 IKZF5Q9H5V7 419 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 PIF1Q9H611 641 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 ARMC7Q9H6L4 198 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 STOML1Q9UBI4 398 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 ZNF232Q9UNY5 417 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 ANGPT4Q9Y264 503 aa14.08□□□□□ -0.16
TREX1-201ENST00000433541 FLNCQ14315 2725 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 A0A087WZY1 265 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 IGLV3-32A0A0A0MS00 114 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 A0A0G2JPF8 293 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 AGAP5A6NIR3 686 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 HNRNPCL2B2RXH8 293 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 HNRNPCL3B7ZW38 293 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 SHISA8B8ZZ34 492 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 SEC14L5O43304 696 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 OIP5O43482 229 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 HNRNPCL1O60812 293 aaKnown RBP14.07□□□□□ -0.16
TREX1-201ENST00000433541 FAM107AO95990 144 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 NPPAP01160 153 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 GUSBP08236 651 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 TFPTP0C1Z6 253 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 HNRNPCL4P0DMR1 293 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 ARAFP10398 606 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 GPX2P18283 190 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 ME2P23368 584 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 RYKP34925 604 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 NUDT2P50583 147 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 SUMO3P55854 103 aaPredicted RBP14.07□□□□□ -0.16
TREX1-201ENST00000433541 KCNJ10P78508 379 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 CDK6Q00534 326 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 CRYZQ08257 329 aaKnown RBP14.07□□□□□ -0.16
TREX1-201ENST00000433541 LARS2Q15031 903 aaKnown RBP14.07□□□□□ -0.16
TREX1-201ENST00000433541 LIN52Q52LA3 116 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 REEP3Q6NUK4 255 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 CBLN3Q6UW01 205 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 CHERPQ8IWX8 916 aaKnown RBP14.07□□□□□ -0.16
TREX1-201ENST00000433541 OR10A6Q8NH74 314 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 ZNF563Q8TA94 476 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 OIT3Q8WWZ8 545 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 PMM1Q92871 262 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 ZG16BQ96DA0 208 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 TIMP4Q99727 224 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 MED17Q9NVC6 651 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 KCNE5Q9UJ90 142 aa14.07□□□□□ -0.16
TREX1-201ENST00000433541 ERRFI1Q9UJM3 462 aaPredicted RBP14.07□□□□□ -0.16
TREX1-201ENST00000433541 MRPS18CQ9Y3D5 142 aaKnown RBP14.07□□□□□ -0.16
TREX1-201ENST00000433541 PCNX1Q96RV3 2341 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 OR2M5A3KFT3 312 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 CLDN24A6NM45 220 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 B4DXG7 233 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 ZIC3O60481 467 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 WDR1O75083 606 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 GABRA1P14867 456 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 PGCP20142 388 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 CHMP24386 653 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 ACVR2AP27037 513 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 AQP1P29972 269 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 STARP49675 285 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 SELPLGQ14242 412 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 SF3B4Q15427 424 aaKnown RBP eCLIP14.06□□□□□ -0.16
TREX1-201ENST00000433541 DCST1Q5T197 706 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 VASNQ6EMK4 673 aa14.06□□□□□ -0.16
TREX1-201ENST00000433541 NANOGP8Q6NSW7 305 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms