RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 MOB3BQ86TA1 216 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 UBQLNLQ8IYU4 475 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 CSNK1A1LQ8N752 337 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 ZNF485Q8NCK3 441 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 SHC3Q92529 594 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 PNO1Q9NRX1 252 aaKnown RBP4.7□□□□□ -1.66
USP54-206ENST00000433394 SLC2A6Q9UGQ3 507 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 RSPH14Q9UHP6 348 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 ZNF608Q9ULD9 1512 aaPredicted RBP4.7□□□□□ -1.66
USP54-206ENST00000433394 CLIP1P30622 1438 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 PTCH1Q13635 1447 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 TDRD15B5MCY1 1934 aaKnown RBP4.7□□□□□ -1.66
USP54-206ENST00000433394 GRIN2AQ12879 1464 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 KIAA0586Q9BVV6 1533 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 ZNF840PA6NDX5 716 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 CCT8L1PA6NM43 557 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 TMEM110-MUSTN1A8MSY1 372 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 A8MX80 341 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 PALMO75781 387 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 CGAP01215 116 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 IDSP22304 550 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 UQCRC2P22695 453 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 HPCAL1P37235 193 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 XCR1P46094 333 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 BDKRB1P46663 353 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 OR1D4P47884 311 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 IST1P53990 364 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 RPL8P62917 257 aaKnown RBP4.69□□□□□ -1.66
USP54-206ENST00000433394 EWSR1Q01844 656 aaKnown RBP eCLIP4.69□□□□□ -1.66
USP54-206ENST00000433394 COX10Q12887 443 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 KCNJ11Q14654 390 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 ZMYND11Q15326 602 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 Q6ZPB1 254 aaPredicted RBP4.69□□□□□ -1.66
USP54-206ENST00000433394 GTSCR1Q86UQ5 136 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 LRRC43Q8N309 656 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 SPEM1Q8N4L4 309 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 OR2T3Q8NH03 318 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 RPRD1AQ96P16 312 aaPredicted RBP4.69□□□□□ -1.66
USP54-206ENST00000433394 ZBTB18Q99592 522 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 SLC6A7Q99884 636 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 CAPS2Q9BXY5 557 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 MEPEQ9NQ76 525 aaPredicted RBP4.69□□□□□ -1.66
USP54-206ENST00000433394 CLEC5AQ9NY25 188 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 DHRS4-AS1Q9P1J3 65 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 PAK5Q9P286 719 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 SAMD4AQ9UPU9 718 aaKnown RBP4.69□□□□□ -1.66
USP54-206ENST00000433394 IQGAP2Q13576 1575 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 SNAPC4Q5SXM2 1469 aa4.69□□□□□ -1.66
USP54-206ENST00000433394 A0A1W2PPR1 153 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 SAGE2PA6NJ88 616 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 B4DXG7 233 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 SLC17A2O00624 439 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 ZNF208O43345 1280 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 PI15O43692 258 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 NUDT21O43809 227 aaKnown RBP4.68□□□□□ -1.66
USP54-206ENST00000433394 GPRIN2O60269 458 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 NEBLO76041 1014 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 CCDC130P13994 396 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 CAPN2P17655 700 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 HNF1AP20823 631 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 YWHABP31946 246 aaKnown RBP4.68□□□□□ -1.66
USP54-206ENST00000433394 EFNA3P52797 238 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 RPL32P62910 135 aaKnown RBP4.68□□□□□ -1.66
USP54-206ENST00000433394 VLDLRP98155 873 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 ZNF154Q13106 437 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 TGIF1Q15583 401 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 C10orf120Q5SQS8 335 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 RHOXF1Q8NHV9 184 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 M1APQ8TC57 530 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 EMG1Q92979 244 aaKnown RBP4.68□□□□□ -1.66
USP54-206ENST00000433394 C12orf66Q96MD2 445 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 TGM7Q96PF1 710 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 GFRA4Q9GZZ7 299 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 PPDPFQ9H3Y8 114 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 ZNF385DQ9H6B1 395 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 MEAF6Q9HAF1 191 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 APMAPQ9HDC9 416 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 PIPOXQ9P0Z9 390 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 HPCAL4Q9UM19 191 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 NUP160Q12769 1436 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 FMN1Q68DA7 1419 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 FRMPD4Q14CM0 1322 aa4.68□□□□□ -1.66
USP54-206ENST00000433394 MAP3K1Q13233 1512 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 UGGT2Q9NYU1 1516 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 KANK1Q14678 1352 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 METTL21EPA6NDL7 271 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 OR7A17O14581 309 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 ARPC3O15145 178 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 POLR2DO15514 142 aaKnown RBP4.67□□□□□ -1.66
USP54-206ENST00000433394 HMMRO75330 724 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 B3GAT3O94766 335 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 SLC2A10O95528 541 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 UMPSP11172 480 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 LAMP1P11279 417 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 CPN1P15169 458 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 TPSB2P20231 275 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 PTBP1P26599 531 aaKnown RBP eCLIP4.67□□□□□ -1.66
USP54-206ENST00000433394 MAP2K1Q02750 393 aaPredicted RBP4.67□□□□□ -1.66
USP54-206ENST00000433394 RAB40BQ12829 278 aa4.67□□□□□ -1.66
USP54-206ENST00000433394 RUNX3Q13761 415 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms